Item | Value |
---|---|
RNA id | XM_034308219.1 |
length | 462 |
RNA type | mRNA |
GC content | 0.59 |
exon number | 2 |
gene id | mrpl57 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047604.1 |
NCBI id | CM018550.1 |
chromosome length | 29376037 |
location | 29072704 ~ 29075467 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
id | name | namespace |
---|---|---|
GO:0005761 | mitochondrial ribosome | cellular_component |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU205226 | lncRNA | downstream | 1279 | 29070035 ~ 29071425 (-) | True | G173338 |
TU205107 | lncRNA | downstream | 57775 | 29014349 ~ 29014929 (-) | True | G173262 |
TU205103 | lncRNA | downstream | 87463 | 28933960 ~ 28985241 (-) | True | G173260 |
TU205105 | lncRNA | downstream | 88643 | 28933960 ~ 28984061 (-) | False | G173260 |
TU205104 | lncRNA | downstream | 88768 | 28933960 ~ 28983936 (-) | False | G173260 |
TU205228 | lncRNA | upstream | 796 | 29076263 ~ 29077297 (-) | True | G173339 |
TU205160 | lncRNA | upstream | 2947 | 29078414 ~ 29080610 (-) | True | G173288 |
TU205240 | lncRNA | upstream | 32409 | 29107876 ~ 29108297 (-) | True | G173349 |
TU205241 | lncRNA | upstream | 32409 | 29107876 ~ 29108297 (-) | False | G173349 |
TU205336 | lncRNA | upstream | 156146 | 29231613 ~ 29231919 (-) | True | G173431 |
XM_034307851.1 | mRNA | downstream | 76547 | 28987359 ~ 28996157 (-) | True | khk |
XM_034307850.1 | mRNA | downstream | 76548 | 28987359 ~ 28996156 (-) | False | khk |
XM_034307852.1 | mRNA | downstream | 76549 | 28987359 ~ 28996155 (-) | False | khk |
XM_034307776.1 | mRNA | downstream | 143809 | 28916376 ~ 28928895 (-) | True | gpn1 |
XM_026925987.2 | mRNA | downstream | 164152 | 28900904 ~ 28908552 (-) | False | stmn4l |
XM_034308210.1 | mRNA | upstream | 13705 | 29089172 ~ 29092223 (-) | True | calm1a |
XM_034308211.1 | mRNA | upstream | 13767 | 29089234 ~ 29091389 (-) | False | calm1a |
XM_034308295.1 | mRNA | upstream | 42906 | 29118373 ~ 29130728 (-) | True | ndnfl |
XM_034308366.1 | mRNA | upstream | 62553 | 29138020 ~ 29146605 (-) | True | LOC113525666 |
XM_034307914.1 | mRNA | upstream | 170502 | 29245969 ~ 29329065 (-) | True | smyd3 |
TU205159 | other | downstream | 22678 | 28836892 ~ 29050026 (-) | True | G173287 |
XR_004578919.1 | other | downstream | 164152 | 28900904 ~ 28908552 (-) | False | stmn4l |
XR_004578918.1 | other | downstream | 164152 | 28900904 ~ 28908552 (-) | False | stmn4l |
XR_004578917.1 | other | downstream | 164152 | 28900904 ~ 28908552 (-) | False | stmn4l |
XR_004578916.1 | other | downstream | 164152 | 28900904 ~ 28908552 (-) | True | stmn4l |
TU205341 | other | upstream | 160452 | 29235919 ~ 29239270 (-) | True | G173434 |
TU205344 | other | upstream | 251459 | 29326926 ~ 29329076 (-) | False | smyd3 |