Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598803 |
| length | 372 |
| RNA type | V_segment |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC117598803 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22091363 ~ 22091837 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254686 | lncRNA | upstream | 31607 | 22058344 ~ 22059756 (+) | True | G215093 |
| TU254600 | lncRNA | upstream | 70628 | 22015818 ~ 22020735 (+) | True | G215035 |
| TU254643 | lncRNA | upstream | 96298 | 21916419 ~ 21995065 (+) | True | G215069 |
| TU254659 | lncRNA | upstream | 125130 | 21923978 ~ 21966233 (+) | True | G215075 |
| TU254658 | lncRNA | upstream | 156346 | 21923978 ~ 21935017 (+) | False | G215075 |
| TU254702 | lncRNA | downstream | 41365 | 22133202 ~ 22401320 (+) | True | G215107 |
| XR_004579409.1 | lncRNA | downstream | 45458 | 22137295 ~ 22139333 (+) | True | LOC117598974 |
| TU254726 | lncRNA | downstream | 169054 | 22260891 ~ 22282993 (+) | True | G215127 |
| TU254755 | lncRNA | downstream | 248384 | 22340221 ~ 22343637 (+) | True | G215149 |
| TU254759 | lncRNA | downstream | 310113 | 22401950 ~ 22405524 (+) | True | G215153 |
| XM_034309812.1 | mRNA | upstream | 459457 | 21620631 ~ 21631906 (+) | True | rest |
| XM_034309844.1 | mRNA | upstream | 527562 | 21514573 ~ 21563801 (+) | False | LOC113540569 |
| XM_034309814.1 | mRNA | downstream | 371317 | 22463154 ~ 22490911 (+) | True | LOC113546930 |
| XM_034309815.1 | mRNA | downstream | 445665 | 22537502 ~ 22548866 (+) | True | LOC113546929 |
| XM_026947097.2 | mRNA | downstream | 523022 | 22614859 ~ 22621980 (+) | True | cckb |
| XM_034310060.1 | mRNA | downstream | 641898 | 22733735 ~ 22754432 (+) | False | rnf44 |
| XM_034310059.1 | mRNA | downstream | 649103 | 22740940 ~ 22754432 (+) | True | rnf44 |
| LOC117598893 | other | upstream | 1260 | 22089637 ~ 22090103 (+) | True | LOC117598893 |
| LOC117598965 | other | upstream | 3951 | 22086984 ~ 22087412 (+) | False | LOC117598965 |
| TU254576 | other | upstream | 3954 | 22075405 ~ 22087409 (+) | True | LOC117598965 |
| LOC117598802 | other | upstream | 6114 | 22082912 ~ 22085249 (+) | True | LOC117598802 |
| LOC117598856 | other | upstream | 14535 | 22076283 ~ 22076828 (+) | True | LOC117598856 |
| LOC117598915 | other | downstream | 11799 | 22103636 ~ 22104185 (+) | True | LOC117598915 |
| LOC117598894 | other | downstream | 13951 | 22105788 ~ 22106309 (+) | True | LOC117598894 |
| LOC117598913 | other | downstream | 15767 | 22107604 ~ 22108104 (+) | True | LOC117598913 |
| LOC117598936 | other | downstream | 18541 | 22110378 ~ 22110821 (+) | True | LOC117598936 |
| TU254697 | other | downstream | 20094 | 22111931 ~ 22112433 (+) | False | LOC117598804 |
