Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254998 |
| length | 390 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC117598812 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22227441 ~ 22227947 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254995 | lncRNA | downstream | 30036 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU254781 | lncRNA | downstream | 87308 | 22125672 ~ 22140140 (-) | True | G215172 |
| TU254985 | lncRNA | downstream | 91441 | 22080162 ~ 22136007 (-) | True | G215221 |
| TU254991 | lncRNA | downstream | 94083 | 22121456 ~ 22133365 (-) | True | G215224 |
| TU254780 | lncRNA | downstream | 144605 | 22025483 ~ 22082843 (-) | True | G215171 |
| TU254864 | lncRNA | upstream | 9024 | 22236967 ~ 22240962 (-) | False | G215182 |
| TU254889 | lncRNA | upstream | 9024 | 22236967 ~ 22237511 (-) | False | G215182 |
| TU254808 | lncRNA | upstream | 26483 | 22254426 ~ 22283330 (-) | False | G215182 |
| TU254830 | lncRNA | upstream | 33054 | 22260997 ~ 22283330 (-) | False | G215182 |
| TU255019 | lncRNA | upstream | 111099 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| XM_026936343.2 | mRNA | downstream | 613573 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 613573 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 847232 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 860336 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 98783 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 171742 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 324781 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 325686 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 325687 | 22553630 ~ 22582102 (-) | False | topaz1 |
| TU254829 | other | downstream | 4587 | 21809753 ~ 22222861 (-) | False | G215182 |
| TU254858 | other | downstream | 4587 | 21812761 ~ 22222861 (-) | False | G215182 |
| LOC117598884 | other | downstream | 4597 | 22222397 ~ 22222851 (-) | True | LOC117598884 |
| LOC117598811 | other | downstream | 8384 | 22217308 ~ 22219064 (-) | True | LOC117598811 |
| TU254974 | other | downstream | 10378 | 21957320 ~ 22217070 (-) | False | G215211 |
| LOC117598926 | other | upstream | 2215 | 22230158 ~ 22230602 (-) | True | LOC117598926 |
| TU254814 | other | upstream | 2223 | 22230166 ~ 22247325 (-) | False | G215182 |
| TU254823 | other | upstream | 2223 | 22230166 ~ 22283330 (-) | False | G215182 |
| TU254827 | other | upstream | 3328 | 22231271 ~ 22240962 (-) | False | G215182 |
| TU254875 | other | upstream | 3328 | 22231271 ~ 22244600 (-) | False | G215182 |
