Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598855 |
| length | 771 |
| RNA type | V_segment |
| GC content | 0.41 |
| exon number | 2 |
| gene id | LOC117598855 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21726462 ~ 21727321 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K06856 | IGH; immunoglobulin heavy chain |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254625 | lncRNA | upstream | 8386 | 21717692 ~ 21718076 (+) | True | G215055 |
| TU254607 | lncRNA | upstream | 69627 | 21656261 ~ 21656835 (+) | True | G215042 |
| TU254346 | lncRNA | upstream | 91388 | 21634851 ~ 21635074 (+) | True | G214829 |
| TU254342 | lncRNA | upstream | 109168 | 21617095 ~ 21617294 (+) | True | G214825 |
| TU254247 | lncRNA | upstream | 161086 | 21557990 ~ 21565376 (+) | True | LOC113540569 |
| TU254636 | lncRNA | downstream | 46902 | 21774223 ~ 21807343 (+) | True | G215064 |
| XR_004579408.1 | lncRNA | downstream | 160710 | 21888031 ~ 21888800 (+) | True | LOC117598973 |
| XR_004579405.1 | lncRNA | downstream | 185291 | 21912612 ~ 21913349 (+) | True | LOC117598970 |
| TU254643 | lncRNA | downstream | 189098 | 21916419 ~ 21995065 (+) | True | G215069 |
| TU254658 | lncRNA | downstream | 196657 | 21923978 ~ 21935017 (+) | False | G215075 |
| XM_034309812.1 | mRNA | upstream | 94556 | 21620631 ~ 21631906 (+) | True | rest |
| XM_034309844.1 | mRNA | upstream | 162661 | 21514573 ~ 21563801 (+) | False | LOC113540569 |
| XM_034309814.1 | mRNA | downstream | 735833 | 22463154 ~ 22490911 (+) | True | LOC113546930 |
| XM_034309815.1 | mRNA | downstream | 810181 | 22537502 ~ 22548866 (+) | True | LOC113546929 |
| XM_026947097.2 | mRNA | downstream | 887538 | 22614859 ~ 22621980 (+) | True | cckb |
| XM_034310060.1 | mRNA | downstream | 1006414 | 22733735 ~ 22754432 (+) | False | rnf44 |
| XM_034310059.1 | mRNA | downstream | 1013619 | 22740940 ~ 22754432 (+) | True | rnf44 |
| LOC117598966 | other | upstream | 5401 | 21720633 ~ 21721061 (+) | True | LOC117598966 |
| TU254573 | other | upstream | 5403 | 21711194 ~ 21721059 (+) | True | G215008 |
| LOC117598875 | other | upstream | 11838 | 21713929 ~ 21714624 (+) | True | LOC117598875 |
| LOC117598918 | other | upstream | 14684 | 21711315 ~ 21711778 (+) | True | LOC117598918 |
| TU254575 | other | upstream | 14693 | 21664558 ~ 21711769 (+) | True | G215010 |
| LOC117598777 | other | downstream | 3082 | 21730403 ~ 21731069 (+) | True | LOC117598777 |
| LOC117598939 | other | downstream | 96348 | 21823669 ~ 21824112 (+) | True | LOC117598939 |
| LOC117598860 | other | downstream | 102226 | 21829547 ~ 21830139 (+) | True | LOC117598860 |
| LOC117598953 | other | downstream | 104444 | 21831765 ~ 21832218 (+) | False | LOC117598953 |
| TU254641 | other | downstream | 104449 | 21831770 ~ 21839896 (+) | True | LOC117598953 |
