Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598879 |
| length | 440 |
| RNA type | V_segment |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC117598879 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22377290 ~ 22377847 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254755 | lncRNA | upstream | 33653 | 22340221 ~ 22343637 (+) | True | G215149 |
| TU254726 | lncRNA | upstream | 94297 | 22260891 ~ 22282993 (+) | True | G215127 |
| XR_004579409.1 | lncRNA | upstream | 237957 | 22137295 ~ 22139333 (+) | True | LOC117598974 |
| TU254689 | lncRNA | upstream | 244281 | 22077490 ~ 22133009 (+) | True | G215095 |
| TU254686 | lncRNA | upstream | 317534 | 22058344 ~ 22059756 (+) | True | G215093 |
| TU254759 | lncRNA | downstream | 24103 | 22401950 ~ 22405524 (+) | True | G215153 |
| TU255084 | lncRNA | downstream | 346840 | 22724687 ~ 22726646 (+) | True | G215294 |
| TU255128 | lncRNA | downstream | 357924 | 22735771 ~ 22735986 (+) | True | G215336 |
| TU255136 | lncRNA | downstream | 400769 | 22778616 ~ 22779241 (+) | True | G215343 |
| TU255137 | lncRNA | downstream | 402443 | 22780290 ~ 22780576 (+) | True | trnat-cgu_7 |
| XM_034309812.1 | mRNA | upstream | 745384 | 21620631 ~ 21631906 (+) | True | rest |
| XM_034309844.1 | mRNA | upstream | 813489 | 21514573 ~ 21563801 (+) | False | LOC113540569 |
| XM_034309814.1 | mRNA | downstream | 85307 | 22463154 ~ 22490911 (+) | True | LOC113546930 |
| XM_034309815.1 | mRNA | downstream | 159655 | 22537502 ~ 22548866 (+) | True | LOC113546929 |
| XM_026947097.2 | mRNA | downstream | 237012 | 22614859 ~ 22621980 (+) | True | cckb |
| XM_034310060.1 | mRNA | downstream | 355888 | 22733735 ~ 22754432 (+) | False | rnf44 |
| XM_034310059.1 | mRNA | downstream | 363093 | 22740940 ~ 22754432 (+) | True | rnf44 |
| TU254572 | other | upstream | 1760 | 22374996 ~ 22375530 (+) | True | LOC117598952 |
| LOC117598952 | other | upstream | 1767 | 22374994 ~ 22375523 (+) | False | LOC117598952 |
| LOC117598895 | other | upstream | 4267 | 22372271 ~ 22373023 (+) | True | LOC117598895 |
| LOC117598854 | other | upstream | 167965 | 22208707 ~ 22209325 (+) | True | LOC117598854 |
| TU254588 | other | upstream | 171004 | 22198939 ~ 22206286 (+) | True | LOC117598933 |
| LOC117598924 | other | downstream | 1396 | 22379243 ~ 22379686 (+) | True | LOC117598924 |
| LOC117598944 | other | downstream | 4041 | 22381888 ~ 22382325 (+) | True | LOC117598944 |
| LOC117598883 | other | downstream | 9850 | 22387697 ~ 22388149 (+) | True | LOC117598883 |
| LOC117598922 | other | downstream | 12512 | 22390359 ~ 22390822 (+) | True | LOC117598922 |
| LOC117598940 | other | downstream | 19265 | 22397112 ~ 22397570 (+) | True | LOC117598940 |
