Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598883 |
| length | 364 |
| RNA type | V_segment |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC117598883 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22387697 ~ 22388149 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254755 | lncRNA | upstream | 44060 | 22340221 ~ 22343637 (+) | True | G215149 |
| TU254726 | lncRNA | upstream | 104704 | 22260891 ~ 22282993 (+) | True | G215127 |
| XR_004579409.1 | lncRNA | upstream | 248364 | 22137295 ~ 22139333 (+) | True | LOC117598974 |
| TU254689 | lncRNA | upstream | 254688 | 22077490 ~ 22133009 (+) | True | G215095 |
| TU254686 | lncRNA | upstream | 327941 | 22058344 ~ 22059756 (+) | True | G215093 |
| TU254759 | lncRNA | downstream | 13801 | 22401950 ~ 22405524 (+) | True | G215153 |
| TU255084 | lncRNA | downstream | 336538 | 22724687 ~ 22726646 (+) | True | G215294 |
| TU255128 | lncRNA | downstream | 347622 | 22735771 ~ 22735986 (+) | True | G215336 |
| TU255136 | lncRNA | downstream | 390467 | 22778616 ~ 22779241 (+) | True | G215343 |
| TU255137 | lncRNA | downstream | 392141 | 22780290 ~ 22780576 (+) | True | trnat-cgu_7 |
| XM_034309812.1 | mRNA | upstream | 755791 | 21620631 ~ 21631906 (+) | True | rest |
| XM_034309844.1 | mRNA | upstream | 823896 | 21514573 ~ 21563801 (+) | False | LOC113540569 |
| XM_034309814.1 | mRNA | downstream | 75005 | 22463154 ~ 22490911 (+) | True | LOC113546930 |
| XM_034309815.1 | mRNA | downstream | 149353 | 22537502 ~ 22548866 (+) | True | LOC113546929 |
| XM_026947097.2 | mRNA | downstream | 226710 | 22614859 ~ 22621980 (+) | True | cckb |
| XM_034310060.1 | mRNA | downstream | 345586 | 22733735 ~ 22754432 (+) | False | rnf44 |
| XM_034310059.1 | mRNA | downstream | 352791 | 22740940 ~ 22754432 (+) | True | rnf44 |
| LOC117598944 | other | upstream | 5372 | 22381888 ~ 22382325 (+) | True | LOC117598944 |
| LOC117598924 | other | upstream | 8011 | 22379243 ~ 22379686 (+) | True | LOC117598924 |
| LOC117598879 | other | upstream | 9850 | 22377290 ~ 22377847 (+) | True | LOC117598879 |
| TU254572 | other | upstream | 12167 | 22374996 ~ 22375530 (+) | True | LOC117598952 |
| LOC117598952 | other | upstream | 12174 | 22374994 ~ 22375523 (+) | False | LOC117598952 |
| LOC117598922 | other | downstream | 2210 | 22390359 ~ 22390822 (+) | True | LOC117598922 |
| LOC117598940 | other | downstream | 8963 | 22397112 ~ 22397570 (+) | True | LOC117598940 |
| TU254763 | other | downstream | 74951 | 22463100 ~ 22469583 (+) | False | LOC113546930 |
| LOC113546936 | other | downstream | 82030 | 22470179 ~ 22470678 (+) | True | LOC113546936 |
| LOC117598850 | other | downstream | 107059 | 22495208 ~ 22535776 (+) | True | LOC117598850 |
