Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598902 |
| length | 364 |
| RNA type | V_segment |
| GC content | 0.48 |
| exon number | 2 |
| gene id | LOC117598902 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22240497 ~ 22240949 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254889 | lncRNA | downstream | 2986 | 22236967 ~ 22237511 (-) | False | G215182 |
| TU254995 | lncRNA | downstream | 43085 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU254781 | lncRNA | downstream | 100357 | 22125672 ~ 22140140 (-) | True | G215172 |
| TU254985 | lncRNA | downstream | 104490 | 22080162 ~ 22136007 (-) | True | G215221 |
| TU254808 | lncRNA | upstream | 13477 | 22254426 ~ 22283330 (-) | False | G215182 |
| TU254830 | lncRNA | upstream | 20048 | 22260997 ~ 22283330 (-) | False | G215182 |
| TU255019 | lncRNA | upstream | 98093 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255027 | lncRNA | upstream | 149407 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255043 | lncRNA | upstream | 205173 | 22446122 ~ 22543980 (-) | True | G215262 |
| XM_026936343.2 | mRNA | downstream | 626622 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 626622 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 860281 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 873385 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 85777 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 158736 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 311775 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 312680 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 312681 | 22553630 ~ 22582102 (-) | False | topaz1 |
| LOC117598907 | other | downstream | 8029 | 22231972 ~ 22232468 (-) | True | LOC117598907 |
| LOC117598926 | other | downstream | 9895 | 22230158 ~ 22230602 (-) | True | LOC117598926 |
| LOC117598812 | other | downstream | 12550 | 22227441 ~ 22227947 (-) | True | LOC117598812 |
| TU254998 | other | downstream | 12554 | 22227448 ~ 22227943 (-) | False | LOC117598812 |
| LOC117598884 | other | downstream | 17646 | 22222397 ~ 22222851 (-) | True | LOC117598884 |
| LOC117598897 | other | upstream | 3115 | 22244064 ~ 22244586 (-) | True | LOC117598897 |
| TU254867 | other | upstream | 3221 | 22244170 ~ 22285703 (-) | False | G215182 |
| TU254832 | other | upstream | 3764 | 22244713 ~ 22247325 (-) | False | G215182 |
| LOC117598930 | other | upstream | 5823 | 22246772 ~ 22247215 (-) | True | LOC117598930 |
| LOC117598908 | other | upstream | 9141 | 22250090 ~ 22250613 (-) | True | LOC117598908 |
