Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598919 |
| length | 395 |
| RNA type | V_segment |
| GC content | 0.45 |
| exon number | 2 |
| gene id | LOC117598919 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 21672822 ~ 21673330 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254775 | lncRNA | downstream | 26928 | 21645119 ~ 21645894 (-) | True | G215168 |
| TU254530 | lncRNA | downstream | 37958 | 21634658 ~ 21634864 (-) | True | G214980 |
| TU254528 | lncRNA | downstream | 40955 | 21628129 ~ 21631867 (-) | True | G214978 |
| TU254527 | lncRNA | downstream | 50901 | 21620678 ~ 21621921 (-) | True | G214977 |
| TU254526 | lncRNA | downstream | 55990 | 21616602 ~ 21616832 (-) | True | G214976 |
| XR_004579406.1 | lncRNA | upstream | 35323 | 21708653 ~ 21709394 (-) | False | LOC117598971 |
| TU254945 | lncRNA | upstream | 50141 | 21723471 ~ 22134451 (-) | True | G215194 |
| TU254878 | lncRNA | upstream | 85226 | 21758556 ~ 21762489 (-) | False | G215182 |
| TU254980 | lncRNA | upstream | 348756 | 22022086 ~ 22078908 (-) | True | G215217 |
| TU254780 | lncRNA | upstream | 352153 | 22025483 ~ 22082843 (-) | True | G215171 |
| XM_026936343.2 | mRNA | downstream | 58947 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 58947 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 292606 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 305710 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 653396 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 726355 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 879394 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 880299 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 880300 | 22553630 ~ 22582102 (-) | False | topaz1 |
| TU254170 | other | downstream | 645563 | 21014439 ~ 21027259 (-) | True | fgf2 |
| trnal-aag_9 | other | downstream | 1259892 | 20412849 ~ 20412930 (-) | True | trnal-aag_9 |
| TU253598 | other | downstream | 1609332 | 20040423 ~ 20063490 (-) | False | slc2a9l2 |
| TU253095 | other | downstream | 2224488 | 19444989 ~ 19448334 (-) | False | rbbp6 |
| trnat-cgu_6 | other | downstream | 2596482 | 19076269 ~ 19076340 (-) | True | trnat-cgu_6 |
| LOC117598868 | other | upstream | 2308 | 21675638 ~ 21676807 (-) | True | LOC117598868 |
| TU254923 | other | upstream | 2941 | 21676271 ~ 22215359 (-) | False | G215187 |
| LOC117598954 | other | upstream | 10694 | 21684024 ~ 21684645 (-) | True | LOC117598954 |
| LOC117598776 | other | upstream | 12367 | 21685697 ~ 21691576 (-) | True | LOC117598776 |
| TU254929 | other | upstream | 12374 | 21685704 ~ 21970414 (-) | True | G215188 |
