Gene
RNA
| Item | Value |
|---|---|
| RNA id | LOC117598921 |
| length | 351 |
| RNA type | V_segment |
| GC content | 0.49 |
| exon number | 2 |
| gene id | LOC117598921 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22277026 ~ 22277469 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254864 | lncRNA | downstream | 36064 | 22236967 ~ 22240962 (-) | False | G215182 |
| TU254889 | lncRNA | downstream | 39515 | 22236967 ~ 22237511 (-) | False | G215182 |
| TU254995 | lncRNA | downstream | 79614 | 22164570 ~ 22197412 (-) | True | G215228 |
| TU254781 | lncRNA | downstream | 136886 | 22125672 ~ 22140140 (-) | True | G215172 |
| TU254985 | lncRNA | downstream | 141019 | 22080162 ~ 22136007 (-) | True | G215221 |
| TU255019 | lncRNA | upstream | 61573 | 22339042 ~ 22344517 (-) | False | LOC117598814 |
| TU255027 | lncRNA | upstream | 112887 | 22390356 ~ 22397751 (-) | True | G215249 |
| TU255043 | lncRNA | upstream | 168653 | 22446122 ~ 22543980 (-) | True | G215262 |
| TU255051 | lncRNA | upstream | 197552 | 22475021 ~ 22507863 (-) | True | G215269 |
| XR_004579407.1 | lncRNA | upstream | 200507 | 22477976 ~ 22480922 (-) | True | LOC117598972 |
| XM_026936343.2 | mRNA | downstream | 663151 | 21586098 ~ 21613875 (-) | False | b4galt1l |
| XM_026936342.2 | mRNA | downstream | 663151 | 21586098 ~ 21613875 (-) | True | b4galt1l |
| XM_034309841.1 | mRNA | downstream | 896810 | 21368754 ~ 21380216 (-) | True | srp72 |
| XM_026916545.2 | mRNA | downstream | 909914 | 21360562 ~ 21367112 (-) | True | arl9 |
| XM_034309813.1 | mRNA | upstream | 49257 | 22326726 ~ 22345779 (-) | True | LOC117598814 |
| XM_034310140.1 | mRNA | upstream | 122216 | 22399685 ~ 22419910 (-) | False | LOC117598969 |
| XM_034309681.1 | mRNA | upstream | 275255 | 22552724 ~ 22582102 (-) | True | topaz1 |
| XM_026947027.2 | mRNA | upstream | 276160 | 22553629 ~ 22582102 (-) | False | topaz1 |
| XM_026947028.2 | mRNA | upstream | 276161 | 22553630 ~ 22582102 (-) | False | topaz1 |
| LOC117598813 | other | downstream | 1131 | 22275061 ~ 22275895 (-) | True | LOC117598813 |
| TU255003 | other | downstream | 4816 | 22250931 ~ 22272210 (-) | True | G215235 |
| LOC117598948 | other | downstream | 6083 | 22270434 ~ 22270943 (-) | True | LOC117598948 |
| LOC117598869 | other | downstream | 7811 | 22268272 ~ 22269215 (-) | True | LOC117598869 |
| TU254910 | other | downstream | 7934 | 22268552 ~ 22269092 (-) | True | G215187 |
| LOC113546926 | other | upstream | 35318 | 22312787 ~ 22313437 (-) | False | LOC113546926 |
| TU255010 | other | upstream | 35452 | 22312921 ~ 22313871 (-) | True | LOC113546926 |
| LOC117598862 | other | upstream | 42075 | 22319544 ~ 22320275 (-) | True | LOC117598862 |
| XR_004579410.1 | other | upstream | 43705 | 22321174 ~ 22321733 (-) | True | LOC117598975 |
| TU255018 | other | upstream | 61573 | 22339042 ~ 22364265 (-) | False | LOC117598814 |
