Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU254598 |
| length | 396 |
| RNA type | TUCP |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC117598959 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 22119975 ~ 22120463 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU254686 | lncRNA | upstream | 60219 | 22058344 ~ 22059756 (+) | True | G215093 |
| TU254600 | lncRNA | upstream | 99240 | 22015818 ~ 22020735 (+) | True | G215035 |
| TU254643 | lncRNA | upstream | 124910 | 21916419 ~ 21995065 (+) | True | G215069 |
| TU254659 | lncRNA | upstream | 153742 | 21923978 ~ 21966233 (+) | True | G215075 |
| TU254658 | lncRNA | upstream | 184958 | 21923978 ~ 21935017 (+) | False | G215075 |
| TU254702 | lncRNA | downstream | 12739 | 22133202 ~ 22401320 (+) | True | G215107 |
| XR_004579409.1 | lncRNA | downstream | 16832 | 22137295 ~ 22139333 (+) | True | LOC117598974 |
| TU254726 | lncRNA | downstream | 140428 | 22260891 ~ 22282993 (+) | True | G215127 |
| TU254755 | lncRNA | downstream | 219758 | 22340221 ~ 22343637 (+) | True | G215149 |
| TU254759 | lncRNA | downstream | 281487 | 22401950 ~ 22405524 (+) | True | G215153 |
| XM_034309812.1 | mRNA | upstream | 488069 | 21620631 ~ 21631906 (+) | True | rest |
| XM_034309844.1 | mRNA | upstream | 556174 | 21514573 ~ 21563801 (+) | False | LOC113540569 |
| XM_034309814.1 | mRNA | downstream | 342691 | 22463154 ~ 22490911 (+) | True | LOC113546930 |
| XM_034309815.1 | mRNA | downstream | 417039 | 22537502 ~ 22548866 (+) | True | LOC113546929 |
| XM_026947097.2 | mRNA | downstream | 494396 | 22614859 ~ 22621980 (+) | True | cckb |
| XM_034310060.1 | mRNA | downstream | 613272 | 22733735 ~ 22754432 (+) | False | rnf44 |
| XM_034310059.1 | mRNA | downstream | 620477 | 22740940 ~ 22754432 (+) | True | rnf44 |
| TU254651 | other | upstream | 6022 | 21888031 ~ 22113953 (+) | False | G215072 |
| TU254647 | other | upstream | 6022 | 22113281 ~ 22113953 (+) | False | G215072 |
| LOC117598804 | other | upstream | 7190 | 22111937 ~ 22112785 (+) | True | LOC117598804 |
| TU254697 | other | upstream | 7542 | 22111931 ~ 22112433 (+) | False | LOC117598804 |
| LOC117598936 | other | upstream | 9154 | 22110378 ~ 22110821 (+) | True | LOC117598936 |
| TU254585 | other | downstream | 6465 | 22126928 ~ 22131182 (+) | True | LOC117598947 |
| LOC117598947 | other | downstream | 6474 | 22126937 ~ 22131176 (+) | False | LOC117598947 |
| LOC117598906 | other | downstream | 20321 | 22140784 ~ 22141255 (+) | True | LOC117598906 |
| TU254577 | other | downstream | 21535 | 22141998 ~ 22183982 (+) | True | G215012 |
| LOC117598961 | other | downstream | 21622 | 22142085 ~ 22142516 (+) | True | LOC117598961 |
