Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU240425 |
| length | 1026 |
| lncRNA type | read_through |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC113525016 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 281212 ~ 367855 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU240438 | lncRNA | upstream | 83200 | 201950 ~ 202805 (+) | False | G203081 |
| TU240439 | lncRNA | upstream | 83200 | 201950 ~ 202805 (+) | False | G203081 |
| TU240381 | lncRNA | upstream | 110014 | 175433 ~ 175991 (+) | True | G203058 |
| TU240383 | lncRNA | upstream | 110014 | 175433 ~ 175991 (+) | False | G203058 |
| TU240368 | lncRNA | upstream | 127072 | 158552 ~ 158933 (+) | True | G203049 |
| TU240415 | lncRNA | downstream | 107182 | 445474 ~ 503897 (+) | True | G203071 |
| TU240501 | lncRNA | downstream | 171627 | 509919 ~ 512745 (+) | False | G203134 |
| TU240503 | lncRNA | downstream | 171627 | 509919 ~ 512745 (+) | True | G203134 |
| TU240514 | lncRNA | downstream | 175297 | 513589 ~ 515888 (+) | True | G203135 |
| TU240522 | lncRNA | downstream | 193095 | 531387 ~ 531618 (+) | True | G203141 |
| XM_034310145.1 | mRNA | upstream | 16089 | 266880 ~ 269916 (+) | False | prl |
| XM_034310096.1 | mRNA | upstream | 114053 | 170845 ~ 171952 (+) | False | LOC117598847 |
| XM_034310097.1 | mRNA | upstream | 114053 | 170845 ~ 171952 (+) | True | LOC117598847 |
| XM_026911782.2 | mRNA | upstream | 222599 | 55561 ~ 63406 (+) | True | syt5a |
| XM_026911773.2 | mRNA | upstream | 280223 | 2041 ~ 5782 (+) | True | LOC113525294 |
| XM_034310279.1 | mRNA | downstream | 9430 | 347722 ~ 356931 (+) | True | rras |
| XM_026911411.2 | mRNA | downstream | 25085 | 363377 ~ 369013 (+) | True | prrg2 |
| XM_026911412.2 | mRNA | downstream | 25086 | 363378 ~ 369013 (+) | False | prrg2 |
| XM_034309702.1 | mRNA | downstream | 32274 | 370566 ~ 404291 (+) | True | prr12b |
| XM_026911416.2 | mRNA | downstream | 80459 | 418751 ~ 421225 (+) | True | LOC113525002 |
| TU240434 | other | upstream | 16185 | 267579 ~ 269820 (+) | False | prl |
| TU240437 | other | upstream | 83200 | 201950 ~ 202805 (+) | True | G203081 |
| TU240365 | other | upstream | 122869 | 156620 ~ 163136 (+) | True | G203047 |
| TU240364 | other | upstream | 124893 | 155327 ~ 161112 (+) | True | G203046 |
| TU240520 | other | downstream | 186520 | 524812 ~ 527620 (+) | False | LOC117598976 |
| TU240776 | other | downstream | 333932 | 672224 ~ 676839 (+) | False | thoc6 |
| TU240792 | other | downstream | 369482 | 707774 ~ 710443 (+) | False | rnf25 |
| TU240780 | other | downstream | 388515 | 726807 ~ 732854 (+) | False | si:dkey-16l2.17 |
| TU240808 | other | downstream | 414983 | 753275 ~ 758058 (+) | False | fus |
