Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579345.1 |
| length | 650 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 3 |
| gene id | LOC113525022 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 252070 ~ 259480 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU240567 | lncRNA | downstream | 65572 | 184940 ~ 187021 (-) | True | G203174 |
| TU240550 | lncRNA | downstream | 73222 | 179034 ~ 179371 (-) | True | G203164 |
| TU240563 | lncRNA | downstream | 76601 | 175626 ~ 175992 (-) | True | G203173 |
| TU240538 | lncRNA | upstream | 37952 | 297393 ~ 371373 (-) | True | G203152 |
| TU240544 | lncRNA | upstream | 43136 | 302577 ~ 341286 (-) | True | G203158 |
| TU240553 | lncRNA | upstream | 43750 | 303191 ~ 308928 (-) | True | G203167 |
| TU240582 | lncRNA | upstream | 61969 | 321410 ~ 322188 (-) | True | G203189 |
| TU240542 | lncRNA | upstream | 74260 | 333701 ~ 334660 (-) | True | G203156 |
| XM_034310104.1 | mRNA | downstream | 2021 | 203871 ~ 250572 (-) | True | si:dkey-16p21.7 |
| XM_034310105.1 | mRNA | downstream | 2024 | 203871 ~ 250569 (-) | False | si:dkey-16p21.7 |
| XM_034310144.1 | mRNA | downstream | 52201 | 144168 ~ 200392 (-) | True | cpt1cb |
| XM_034310095.1 | mRNA | downstream | 112755 | 116874 ~ 139838 (-) | False | LOC113525295 |
| XM_026911774.2 | mRNA | downstream | 112756 | 116874 ~ 139837 (-) | True | LOC113525295 |
| XM_034309957.1 | mRNA | upstream | 26600 | 286041 ~ 292611 (-) | True | prmt1 |
| XM_034309956.1 | mRNA | upstream | 28765 | 288206 ~ 292612 (-) | False | prmt1 |
| XM_034310146.1 | mRNA | upstream | 146485 | 405926 ~ 416575 (-) | True | si:ch211-195b15.7 |
| XM_034309749.1 | mRNA | upstream | 247929 | 507370 ~ 515804 (-) | False | rcn3 |
| XM_026911421.2 | mRNA | upstream | 252920 | 512361 ~ 516950 (-) | True | rcn3 |
| TU240560 | other | downstream | 90009 | 162126 ~ 162584 (-) | True | G203170 |
| TU240319 | other | downstream | 198318 | 37599 ~ 54275 (-) | False | aldh16a1 |
| TU240540 | other | upstream | 72100 | 331541 ~ 333644 (-) | True | G203154 |
| TU240668 | other | upstream | 226781 | 486222 ~ 489731 (-) | False | G203254 |
| TU240992 | other | upstream | 481803 | 741244 ~ 750799 (-) | True | G203488 |
| TU240994 | other | upstream | 481956 | 741397 ~ 743393 (-) | False | LOC117598978 |
| TU240991 | other | upstream | 483252 | 742693 ~ 749361 (-) | False | G203488 |
