Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU240714 |
| length | 292 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G203268 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 533292 ~ 533583 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU240706 | lncRNA | downstream | 27380 | 505316 ~ 505912 (-) | True | G203261 |
| TU240674 | lncRNA | downstream | 43561 | 486309 ~ 489731 (-) | False | G203254 |
| TU240677 | lncRNA | downstream | 43561 | 486309 ~ 489731 (-) | True | G203254 |
| TU240583 | lncRNA | downstream | 161819 | 348585 ~ 371473 (-) | True | G203190 |
| TU240543 | lncRNA | downstream | 173911 | 356233 ~ 359381 (-) | True | G203157 |
| TU240717 | lncRNA | upstream | 15880 | 549463 ~ 549711 (-) | True | G203271 |
| XR_004579336.1 | lncRNA | upstream | 17821 | 551404 ~ 566798 (-) | True | LOC117598763 |
| TU240908 | lncRNA | upstream | 131955 | 665538 ~ 669489 (-) | True | G203425 |
| TU240973 | lncRNA | upstream | 159916 | 693499 ~ 693886 (-) | True | G203471 |
| TU240956 | lncRNA | upstream | 186506 | 720089 ~ 763924 (-) | True | G203458 |
| XM_026911421.2 | mRNA | downstream | 16342 | 512361 ~ 516950 (-) | True | rcn3 |
| XM_034309748.1 | mRNA | downstream | 16684 | 512361 ~ 516608 (-) | False | rcn3 |
| XM_034309749.1 | mRNA | downstream | 17488 | 507370 ~ 515804 (-) | False | rcn3 |
| XM_034310146.1 | mRNA | downstream | 116717 | 405926 ~ 416575 (-) | True | si:ch211-195b15.7 |
| XM_034309956.1 | mRNA | downstream | 240680 | 288206 ~ 292612 (-) | False | prmt1 |
| XM_034310149.1 | mRNA | upstream | 77607 | 611190 ~ 614186 (-) | True | LOC113525013 |
| XM_026911406.2 | mRNA | upstream | 88762 | 622345 ~ 630711 (-) | True | tspan4b |
| XM_034309740.1 | mRNA | upstream | 102101 | 635684 ~ 639207 (-) | True | si:ch73-248e21.7 |
| XM_034309729.1 | mRNA | upstream | 108926 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_034309730.1 | mRNA | upstream | 108926 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| TU240668 | other | downstream | 43561 | 486222 ~ 489731 (-) | False | G203254 |
| TU240540 | other | downstream | 199648 | 331541 ~ 333644 (-) | True | G203154 |
| TU240560 | other | downstream | 370708 | 162126 ~ 162584 (-) | True | G203170 |
| TU240322 | other | downstream | 479017 | 37599 ~ 54275 (-) | False | aldh16a1 |
| TU240992 | other | upstream | 207661 | 741244 ~ 750799 (-) | True | G203488 |
| TU240994 | other | upstream | 207814 | 741397 ~ 743393 (-) | False | LOC117598978 |
| TU240991 | other | upstream | 209110 | 742693 ~ 749361 (-) | False | G203488 |
| TU241063 | other | upstream | 376534 | 910117 ~ 911228 (-) | True | G203544 |
| TU241084 | other | upstream | 511154 | 1044737 ~ 1046555 (-) | False | si:dkey-66i24.7 |
