Item | Value |
---|---|
RNA id | XM_034309754.1 |
length | 1058 |
RNA type | mRNA |
GC content | 0.51 |
exon number | 6 |
gene id | si:dkey-16l2.17 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047607.1 |
NCBI id | CM018553.1 |
chromosome length | 26458119 |
location | 726729 ~ 732890 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU240757 | lncRNA | upstream | 3037 | 684623 ~ 723692 (+) | False | thoc6 |
TU240779 | lncRNA | upstream | 37079 | 680901 ~ 689650 (+) | False | thoc6 |
TU240788 | lncRNA | upstream | 40099 | 679778 ~ 686630 (+) | True | G203328 |
TU240767 | lncRNA | upstream | 56980 | 666824 ~ 669749 (+) | False | thoc6 |
TU240766 | lncRNA | upstream | 74545 | 650051 ~ 652184 (+) | False | unc119.2 |
TU240781 | lncRNA | downstream | 5449 | 738339 ~ 738727 (+) | True | G203321 |
TU240804 | lncRNA | downstream | 8942 | 741832 ~ 743740 (+) | True | G203339 |
TU240807 | lncRNA | downstream | 38881 | 771771 ~ 774024 (+) | False | fus |
TU240820 | lncRNA | downstream | 72310 | 805200 ~ 806345 (+) | False | setd1a |
TU240822 | lncRNA | downstream | 72310 | 805200 ~ 805855 (+) | False | setd1a |
XM_034309733.1 | mRNA | upstream | 444 | 717617 ~ 726285 (+) | True | kat8 |
XM_034310156.1 | mRNA | upstream | 9710 | 707738 ~ 717019 (+) | True | rnf25 |
XM_034309755.1 | mRNA | upstream | 21276 | 690189 ~ 705453 (+) | True | si:dkey-16l2.16 |
XM_034310155.1 | mRNA | upstream | 37312 | 666808 ~ 689417 (+) | True | thoc6 |
XM_026911435.2 | mRNA | upstream | 60382 | 653037 ~ 666347 (+) | True | srrm2 |
XM_034309721.1 | mRNA | downstream | 20177 | 753067 ~ 774250 (+) | True | fus |
XM_034309705.1 | mRNA | downstream | 45950 | 778840 ~ 806153 (+) | False | setd1a |
XM_034309704.1 | mRNA | downstream | 46023 | 778913 ~ 806153 (+) | False | setd1a |
XM_034309703.1 | mRNA | downstream | 46053 | 778943 ~ 806153 (+) | True | setd1a |
XM_034309744.1 | mRNA | downstream | 79136 | 812026 ~ 849880 (+) | False | hsd3b7 |
TU240792 | other | upstream | 16286 | 707774 ~ 710443 (+) | False | rnf25 |
TU240776 | other | upstream | 49890 | 672224 ~ 676839 (+) | False | thoc6 |
TU240520 | other | upstream | 199109 | 524812 ~ 527620 (+) | False | LOC117598976 |
TU240434 | other | upstream | 456909 | 267579 ~ 269820 (+) | False | prl |
TU240437 | other | upstream | 523924 | 201950 ~ 202805 (+) | True | G203081 |
TU240808 | other | downstream | 20385 | 753275 ~ 758058 (+) | False | fus |
TU240783 | other | downstream | 313915 | 1046805 ~ 1051139 (+) | False | armc5 |
TU240880 | other | downstream | 487622 | 1220512 ~ 1236612 (+) | False | paqr4a |
TU241205 | other | downstream | 620444 | 1353334 ~ 1356327 (+) | False | kmt5c |
TU241220 | other | downstream | 828704 | 1561594 ~ 1591075 (+) | False | syt3 |