Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU240908 |
| length | 555 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 3 |
| gene id | G203425 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 665538 ~ 669489 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579336.1 | lncRNA | downstream | 98740 | 551404 ~ 566798 (-) | True | LOC117598763 |
| TU240717 | lncRNA | downstream | 115827 | 549463 ~ 549711 (-) | True | G203271 |
| TU240714 | lncRNA | downstream | 131955 | 533292 ~ 533583 (-) | True | G203268 |
| TU240706 | lncRNA | downstream | 159626 | 505316 ~ 505912 (-) | True | G203261 |
| TU240674 | lncRNA | downstream | 175807 | 486309 ~ 489731 (-) | False | G203254 |
| TU240973 | lncRNA | upstream | 24010 | 693499 ~ 693886 (-) | True | G203471 |
| TU240956 | lncRNA | upstream | 50600 | 720089 ~ 763924 (-) | True | G203458 |
| TU240954 | lncRNA | upstream | 59322 | 728811 ~ 738745 (-) | True | G203456 |
| TU240988 | lncRNA | upstream | 68380 | 737869 ~ 745841 (-) | True | G203486 |
| TU240999 | lncRNA | upstream | 82596 | 752085 ~ 753822 (-) | False | LOC117598979 |
| XM_034309729.1 | mRNA | downstream | 20952 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_034309730.1 | mRNA | downstream | 20952 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_026911438.2 | mRNA | downstream | 20952 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_034309731.1 | mRNA | downstream | 20952 | 642509 ~ 644586 (-) | True | si:ch73-248e21.5 |
| XM_034309728.1 | mRNA | downstream | 21107 | 642509 ~ 644431 (-) | False | si:ch73-248e21.5 |
| XM_034310157.1 | mRNA | upstream | 70179 | 739668 ~ 750458 (-) | True | LOC117598978 |
| XM_034310158.1 | mRNA | upstream | 80574 | 750063 ~ 752243 (-) | True | LOC117598979 |
| XM_034309761.1 | mRNA | upstream | 250518 | 920007 ~ 931906 (-) | True | clec19a |
| XM_034309753.1 | mRNA | upstream | 374780 | 1044269 ~ 1046535 (-) | False | si:dkey-66i24.7 |
| XM_034309766.1 | mRNA | upstream | 386881 | 1056370 ~ 1061679 (-) | False | LOC113528078 |
| TU240668 | other | downstream | 175807 | 486222 ~ 489731 (-) | False | G203254 |
| TU240540 | other | downstream | 331894 | 331541 ~ 333644 (-) | True | G203154 |
| TU240560 | other | downstream | 502954 | 162126 ~ 162584 (-) | True | G203170 |
| TU240322 | other | downstream | 611263 | 37599 ~ 54275 (-) | False | aldh16a1 |
| TU240992 | other | upstream | 71755 | 741244 ~ 750799 (-) | True | G203488 |
| TU240994 | other | upstream | 71908 | 741397 ~ 743393 (-) | False | LOC117598978 |
| TU240991 | other | upstream | 73204 | 742693 ~ 749361 (-) | False | G203488 |
| TU241063 | other | upstream | 240628 | 910117 ~ 911228 (-) | True | G203544 |
| TU241084 | other | upstream | 375248 | 1044737 ~ 1046555 (-) | False | si:dkey-66i24.7 |
