Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU240994 |
| length | 614 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 2 |
| gene id | LOC117598978 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 739668 ~ 750458 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU240954 | lncRNA | downstream | 2652 | 728811 ~ 738745 (-) | True | G203456 |
| TU240973 | lncRNA | downstream | 47511 | 693499 ~ 693886 (-) | True | G203471 |
| TU240908 | lncRNA | downstream | 71908 | 665538 ~ 669489 (-) | True | G203425 |
| XR_004579336.1 | lncRNA | downstream | 174599 | 551404 ~ 566798 (-) | True | LOC117598763 |
| TU240717 | lncRNA | downstream | 191686 | 549463 ~ 549711 (-) | True | G203271 |
| TU240999 | lncRNA | upstream | 8692 | 752085 ~ 753822 (-) | False | LOC117598979 |
| TU241007 | lncRNA | upstream | 22058 | 765451 ~ 766214 (-) | True | G203499 |
| TU241016 | lncRNA | upstream | 33951 | 777344 ~ 805841 (-) | True | G203502 |
| TU241018 | lncRNA | upstream | 35521 | 778914 ~ 800162 (-) | True | G203504 |
| TU241026 | lncRNA | upstream | 48564 | 791957 ~ 849865 (-) | False | G203510 |
| XM_034309729.1 | mRNA | downstream | 96811 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_034309730.1 | mRNA | downstream | 96811 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_026911438.2 | mRNA | downstream | 96811 | 642509 ~ 644586 (-) | False | si:ch73-248e21.5 |
| XM_034309731.1 | mRNA | downstream | 96811 | 642509 ~ 644586 (-) | True | si:ch73-248e21.5 |
| XM_034309728.1 | mRNA | downstream | 96966 | 642509 ~ 644431 (-) | False | si:ch73-248e21.5 |
| XM_034310158.1 | mRNA | upstream | 6670 | 750063 ~ 752243 (-) | True | LOC117598979 |
| XM_034309761.1 | mRNA | upstream | 176614 | 920007 ~ 931906 (-) | True | clec19a |
| XM_034309753.1 | mRNA | upstream | 300876 | 1044269 ~ 1046535 (-) | False | si:dkey-66i24.7 |
| XM_034309766.1 | mRNA | upstream | 312977 | 1056370 ~ 1061679 (-) | False | LOC113528078 |
| XM_034309765.1 | mRNA | upstream | 312977 | 1056370 ~ 1061677 (-) | True | LOC113528078 |
| TU240668 | other | downstream | 251666 | 486222 ~ 489731 (-) | False | G203254 |
| TU240540 | other | downstream | 407753 | 331541 ~ 333644 (-) | True | G203154 |
| TU240560 | other | downstream | 578813 | 162126 ~ 162584 (-) | True | G203170 |
| TU240322 | other | downstream | 687122 | 37599 ~ 54275 (-) | False | aldh16a1 |
| TU241063 | other | upstream | 166724 | 910117 ~ 911228 (-) | True | G203544 |
| TU241084 | other | upstream | 301344 | 1044737 ~ 1046555 (-) | False | si:dkey-66i24.7 |
| TU241260 | other | upstream | 522269 | 1265662 ~ 1345171 (-) | False | G203695 |
| XR_003402975.1 | other | upstream | 755868 | 1499261 ~ 1499350 (-) | True | LOC113528660 |
| XR_003402974.1 | other | upstream | 756122 | 1499515 ~ 1499605 (-) | True | LOC113528659 |
