Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241016 |
| length | 564 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G203502 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 777344 ~ 805841 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241007 | lncRNA | downstream | 11130 | 765451 ~ 766214 (-) | True | G203499 |
| TU240956 | lncRNA | downstream | 13420 | 720089 ~ 763924 (-) | True | G203458 |
| TU240999 | lncRNA | downstream | 23522 | 752085 ~ 753822 (-) | False | LOC117598979 |
| TU240988 | lncRNA | downstream | 31503 | 737869 ~ 745841 (-) | True | G203486 |
| TU240954 | lncRNA | downstream | 38599 | 728811 ~ 738745 (-) | True | G203456 |
| TU241032 | lncRNA | upstream | 11729 | 817570 ~ 884412 (-) | True | G203513 |
| TU241024 | lncRNA | upstream | 42363 | 848204 ~ 849865 (-) | True | G203510 |
| TU241062 | lncRNA | upstream | 97196 | 903037 ~ 903332 (-) | True | G203543 |
| TU241064 | lncRNA | upstream | 106115 | 911956 ~ 913561 (-) | True | G203545 |
| XR_004579337.1 | lncRNA | upstream | 133667 | 939508 ~ 940343 (-) | True | LOC117598764 |
| XM_034310158.1 | mRNA | downstream | 25101 | 750063 ~ 752243 (-) | True | LOC117598979 |
| XM_034310157.1 | mRNA | downstream | 26886 | 739668 ~ 750458 (-) | True | LOC117598978 |
| XM_034309731.1 | mRNA | downstream | 132758 | 642509 ~ 644586 (-) | True | si:ch73-248e21.5 |
| XM_034309761.1 | mRNA | upstream | 114166 | 920007 ~ 931906 (-) | True | clec19a |
| XM_034309753.1 | mRNA | upstream | 238428 | 1044269 ~ 1046535 (-) | False | si:dkey-66i24.7 |
| XM_034309766.1 | mRNA | upstream | 250529 | 1056370 ~ 1061679 (-) | False | LOC113528078 |
| XM_034309765.1 | mRNA | upstream | 250529 | 1056370 ~ 1061677 (-) | True | LOC113528078 |
| XM_034309764.1 | mRNA | upstream | 250529 | 1056370 ~ 1061670 (-) | False | LOC113528078 |
| TU240992 | other | downstream | 26545 | 741244 ~ 750799 (-) | True | G203488 |
| TU240991 | other | downstream | 27983 | 742693 ~ 749361 (-) | False | G203488 |
| TU240994 | other | downstream | 33951 | 741397 ~ 743393 (-) | False | LOC117598978 |
| TU240668 | other | downstream | 287613 | 486222 ~ 489731 (-) | False | G203254 |
| TU240540 | other | downstream | 443700 | 331541 ~ 333644 (-) | True | G203154 |
| TU241063 | other | upstream | 104276 | 910117 ~ 911228 (-) | True | G203544 |
| TU241084 | other | upstream | 238896 | 1044737 ~ 1046555 (-) | False | si:dkey-66i24.7 |
| TU241260 | other | upstream | 459821 | 1265662 ~ 1345171 (-) | False | G203695 |
| XR_003402975.1 | other | upstream | 693420 | 1499261 ~ 1499350 (-) | True | LOC113528660 |
| XR_003402974.1 | other | upstream | 693674 | 1499515 ~ 1499605 (-) | True | LOC113528659 |
