Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241099 |
| length | 270 |
| lncRNA type | inter_gene |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G203564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 954684 ~ 956624 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579337.1 | lncRNA | downstream | 14341 | 939508 ~ 940343 (-) | True | LOC117598764 |
| TU241064 | lncRNA | downstream | 41123 | 911956 ~ 913561 (-) | True | G203545 |
| TU241062 | lncRNA | downstream | 51352 | 903037 ~ 903332 (-) | True | G203543 |
| TU241032 | lncRNA | downstream | 70272 | 817570 ~ 884412 (-) | True | G203513 |
| TU241118 | lncRNA | upstream | 23748 | 980372 ~ 981015 (-) | True | G203577 |
| TU241085 | lncRNA | upstream | 77265 | 1033889 ~ 1066820 (-) | False | si:dkey-66i24.7 |
| TU241087 | lncRNA | upstream | 77265 | 1033889 ~ 1036631 (-) | False | si:dkey-66i24.7 |
| TU241088 | lncRNA | upstream | 77265 | 1033889 ~ 1036631 (-) | True | si:dkey-66i24.7 |
| TU241093 | lncRNA | upstream | 84867 | 1041491 ~ 1043647 (-) | True | G203559 |
| XM_034309761.1 | mRNA | downstream | 22778 | 920007 ~ 931906 (-) | True | clec19a |
| XM_034310158.1 | mRNA | downstream | 202441 | 750063 ~ 752243 (-) | True | LOC117598979 |
| XM_034310157.1 | mRNA | downstream | 204226 | 739668 ~ 750458 (-) | True | LOC117598978 |
| XM_034309728.1 | mRNA | downstream | 310253 | 642509 ~ 644431 (-) | False | si:ch73-248e21.5 |
| XM_034309753.1 | mRNA | upstream | 87645 | 1044269 ~ 1046535 (-) | False | si:dkey-66i24.7 |
| XM_034309766.1 | mRNA | upstream | 99746 | 1056370 ~ 1061679 (-) | False | LOC113528078 |
| XM_034309765.1 | mRNA | upstream | 99746 | 1056370 ~ 1061677 (-) | True | LOC113528078 |
| XM_034309764.1 | mRNA | upstream | 99746 | 1056370 ~ 1061670 (-) | False | LOC113528078 |
| XM_034309709.1 | mRNA | upstream | 154885 | 1111509 ~ 1119731 (-) | True | LOC113528610 |
| TU241063 | other | downstream | 43456 | 910117 ~ 911228 (-) | True | G203544 |
| TU240992 | other | downstream | 203885 | 741244 ~ 750799 (-) | True | G203488 |
| TU240991 | other | downstream | 205323 | 742693 ~ 749361 (-) | False | G203488 |
| TU240994 | other | downstream | 211291 | 741397 ~ 743393 (-) | False | LOC117598978 |
| TU240668 | other | downstream | 464953 | 486222 ~ 489731 (-) | False | G203254 |
| TU241084 | other | upstream | 88113 | 1044737 ~ 1046555 (-) | False | si:dkey-66i24.7 |
| TU241260 | other | upstream | 309038 | 1265662 ~ 1345171 (-) | False | G203695 |
| XR_003402975.1 | other | upstream | 542637 | 1499261 ~ 1499350 (-) | True | LOC113528660 |
| XR_003402974.1 | other | upstream | 542891 | 1499515 ~ 1499605 (-) | True | LOC113528659 |
| XR_004579451.1 | other | upstream | 1046910 | 2003534 ~ 2007788 (-) | False | LOC113527889 |
