Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241208 |
| length | 896 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G203647 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 1362383 ~ 1441015 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241190 | lncRNA | upstream | 49394 | 1309397 ~ 1312989 (+) | True | G203635 |
| TU240861 | lncRNA | upstream | 251536 | 1110529 ~ 1110847 (+) | True | G203385 |
| XR_004579335.1 | lncRNA | upstream | 283957 | 1061190 ~ 1078426 (+) | True | LOC117598762 |
| TU240787 | lncRNA | upstream | 301862 | 1058679 ~ 1060521 (+) | True | G203327 |
| TU240833 | lncRNA | upstream | 478017 | 817391 ~ 884366 (+) | True | G203357 |
| TU241222 | lncRNA | downstream | 5974 | 1446989 ~ 1500793 (+) | True | G203660 |
| TU241224 | lncRNA | downstream | 81211 | 1522226 ~ 1533045 (+) | True | G203662 |
| TU241234 | lncRNA | downstream | 124341 | 1565356 ~ 1566629 (+) | True | G203672 |
| TU241459 | lncRNA | downstream | 331614 | 1772629 ~ 1867011 (+) | False | G203867 |
| TU241477 | lncRNA | downstream | 383963 | 1824978 ~ 1825293 (+) | True | G203885 |
| XM_034310288.1 | mRNA | upstream | 923 | 1353329 ~ 1361460 (+) | True | kmt5c |
| XM_034310224.1 | mRNA | upstream | 17346 | 1324100 ~ 1345037 (+) | True | ppp1caa |
| XM_026916593.2 | mRNA | upstream | 96262 | 1253527 ~ 1266121 (+) | True | coro1a |
| XM_026916889.2 | mRNA | upstream | 125181 | 1220494 ~ 1237202 (+) | True | paqr4a |
| XM_026916380.2 | mRNA | upstream | 252245 | 1078439 ~ 1110138 (+) | False | LOC113528076 |
| XM_026917182.2 | mRNA | downstream | 63863 | 1504878 ~ 1531986 (+) | True | si:ch211-51c14.1 |
| XM_026916803.2 | mRNA | downstream | 120509 | 1561524 ~ 1619974 (+) | True | syt3 |
| XM_026916802.2 | mRNA | downstream | 120509 | 1561524 ~ 1619974 (+) | False | syt3 |
| XM_034310217.1 | mRNA | downstream | 136206 | 1577221 ~ 1619974 (+) | False | syt3 |
| XM_034310285.1 | mRNA | downstream | 190057 | 1631072 ~ 1658296 (+) | True | med25 |
| TU241205 | other | upstream | 6056 | 1353334 ~ 1356327 (+) | False | kmt5c |
| TU240880 | other | upstream | 125771 | 1220512 ~ 1236612 (+) | False | paqr4a |
| TU240783 | other | upstream | 311244 | 1046805 ~ 1051139 (+) | False | armc5 |
| TU240808 | other | upstream | 604325 | 753275 ~ 758058 (+) | False | fus |
| TU240780 | other | upstream | 629529 | 726807 ~ 732854 (+) | False | si:dkey-16l2.17 |
| TU241220 | other | downstream | 120579 | 1561594 ~ 1591075 (+) | False | syt3 |
| TU241504 | other | downstream | 442060 | 1883075 ~ 1885478 (+) | False | ccndx |
| XR_004579364.1 | other | downstream | 714584 | 2155599 ~ 2155849 (+) | True | LOC117598829 |
| TU242114 | other | downstream | 1562657 | 3003672 ~ 3012859 (+) | False | pyya |
| TU242330 | other | downstream | 1751697 | 3192712 ~ 3200133 (+) | False | LOC113527909 |
