Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241710 |
| length | 200 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G204080 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 1731001 ~ 1731200 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579328.1 | lncRNA | downstream | 12210 | 1718013 ~ 1718791 (-) | True | LOC117598750 |
| XR_004579429.1 | lncRNA | downstream | 202768 | 1525663 ~ 1528233 (-) | True | LOC117599001 |
| TU241338 | lncRNA | downstream | 203860 | 1507201 ~ 1527141 (-) | True | G203756 |
| TU241307 | lncRNA | downstream | 230186 | 1499020 ~ 1500815 (-) | True | G203733 |
| TU241309 | lncRNA | downstream | 230186 | 1499020 ~ 1500815 (-) | False | G203733 |
| TU241714 | lncRNA | upstream | 4318 | 1735518 ~ 1735720 (-) | True | G204084 |
| TU241717 | lncRNA | upstream | 18982 | 1750182 ~ 1750391 (-) | True | G204087 |
| TU241720 | lncRNA | upstream | 35451 | 1766651 ~ 1766869 (-) | True | G204090 |
| TU241691 | lncRNA | upstream | 107388 | 1838588 ~ 1893122 (-) | True | G204062 |
| TU241689 | lncRNA | upstream | 125223 | 1856423 ~ 1871551 (-) | True | G204060 |
| XM_026916145.2 | mRNA | downstream | 414826 | 1309888 ~ 1316175 (-) | True | LOC113527946 |
| XM_034309793.1 | mRNA | downstream | 424638 | 1302401 ~ 1306363 (-) | True | LOC113528189 |
| XM_034309758.1 | mRNA | downstream | 436762 | 1282400 ~ 1294239 (-) | True | LOC113525779 |
| XM_034309759.1 | mRNA | downstream | 451449 | 1268382 ~ 1279552 (-) | True | LOC113528234 |
| XM_034310229.1 | mRNA | upstream | 36106 | 1767306 ~ 1812044 (-) | False | mybpc2a |
| XM_034310228.1 | mRNA | upstream | 36106 | 1767306 ~ 1812044 (-) | False | mybpc2a |
| XM_034310227.1 | mRNA | upstream | 36106 | 1767306 ~ 1812044 (-) | True | mybpc2a |
| XM_034310020.1 | mRNA | upstream | 110789 | 1841989 ~ 1859709 (-) | False | akt1s1 |
| XM_034310018.1 | mRNA | upstream | 110789 | 1841989 ~ 1850490 (-) | False | akt1s1 |
| XR_003402974.1 | other | downstream | 231396 | 1499515 ~ 1499605 (-) | True | LOC113528659 |
| XR_003402975.1 | other | downstream | 231651 | 1499261 ~ 1499350 (-) | True | LOC113528660 |
| TU241260 | other | downstream | 385830 | 1265662 ~ 1345171 (-) | False | G203695 |
| TU241084 | other | downstream | 684446 | 1044737 ~ 1046555 (-) | False | si:dkey-66i24.7 |
| TU241063 | other | downstream | 819773 | 910117 ~ 911228 (-) | True | G203544 |
| XR_004579451.1 | other | upstream | 272334 | 2003534 ~ 2007788 (-) | False | LOC113527889 |
| XR_004579450.1 | other | upstream | 272334 | 2003534 ~ 2007787 (-) | False | LOC113527889 |
| XR_004579338.1 | other | upstream | 868509 | 2599709 ~ 2600352 (-) | True | LOC117598767 |
| XR_003402970.1 | other | upstream | 1424096 | 3155296 ~ 3155430 (-) | True | LOC113528655 |
| XR_003402972.1 | other | upstream | 1425417 | 3156617 ~ 3156709 (-) | True | LOC113528657 |
