Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU241929 |
| length | 371 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G204269 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 2264843 ~ 2265213 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU241924 | lncRNA | downstream | 4469 | 2258504 ~ 2260374 (-) | True | G204264 |
| TU241846 | lncRNA | downstream | 50245 | 2213117 ~ 2214598 (-) | True | G204191 |
| TU241841 | lncRNA | downstream | 52400 | 2210785 ~ 2212443 (-) | True | G204187 |
| TU241893 | lncRNA | downstream | 58722 | 2205778 ~ 2206121 (-) | True | G204234 |
| TU241832 | lncRNA | downstream | 69303 | 2187273 ~ 2195540 (-) | False | ifi35 |
| TU241937 | lncRNA | upstream | 59673 | 2324886 ~ 2379453 (-) | True | G204275 |
| TU241938 | lncRNA | upstream | 66463 | 2331676 ~ 2342773 (-) | False | LOC113528223 |
| XR_004579375.1 | lncRNA | upstream | 149106 | 2414319 ~ 2415310 (-) | False | LOC117598835 |
| TU241959 | lncRNA | upstream | 149254 | 2414467 ~ 2415527 (-) | True | LOC117598835 |
| TU241970 | lncRNA | upstream | 168015 | 2433228 ~ 2434080 (-) | False | LOC113528062 |
| XM_034309965.1 | mRNA | downstream | 31548 | 2225611 ~ 2233295 (-) | True | aoc2 |
| XM_026917082.2 | mRNA | downstream | 141007 | 2114102 ~ 2123836 (-) | True | ifi35 |
| XM_026917008.2 | mRNA | downstream | 187366 | 2066177 ~ 2077477 (-) | True | LOC113528455 |
| XM_034310294.1 | mRNA | downstream | 252382 | 1991173 ~ 2012461 (-) | False | LOC113527889 |
| XM_034310005.1 | mRNA | upstream | 4458 | 2269671 ~ 2283303 (-) | True | LOC113528224 |
| XM_034310165.1 | mRNA | upstream | 24204 | 2289417 ~ 2304449 (-) | True | LOC117598982 |
| XM_026916342.2 | mRNA | upstream | 40063 | 2305276 ~ 2323646 (-) | True | LOC113528064 |
| XM_034310168.1 | mRNA | upstream | 73664 | 2338877 ~ 2344912 (-) | True | LOC113528223 |
| XM_034310169.1 | mRNA | upstream | 97911 | 2363124 ~ 2375676 (-) | True | LOC113528065 |
| XR_004579451.1 | other | downstream | 257055 | 2003534 ~ 2007788 (-) | False | LOC113527889 |
| XR_004579450.1 | other | downstream | 257056 | 2003534 ~ 2007787 (-) | False | LOC113527889 |
| XR_003402974.1 | other | downstream | 765238 | 1499515 ~ 1499605 (-) | True | LOC113528659 |
| XR_003402975.1 | other | downstream | 765493 | 1499261 ~ 1499350 (-) | True | LOC113528660 |
| TU241260 | other | downstream | 919672 | 1265662 ~ 1345171 (-) | False | G203695 |
| XR_004579338.1 | other | upstream | 334496 | 2599709 ~ 2600352 (-) | True | LOC117598767 |
| XR_003402970.1 | other | upstream | 890083 | 3155296 ~ 3155430 (-) | True | LOC113528655 |
| XR_003402972.1 | other | upstream | 891404 | 3156617 ~ 3156709 (-) | True | LOC113528657 |
| XR_004579380.1 | other | upstream | 1117618 | 3382831 ~ 3413767 (-) | False | nde1 |
| XR_004579378.1 | other | upstream | 1134532 | 3399745 ~ 3413767 (-) | False | nde1 |
