Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU242114 |
| length | 631 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 4 |
| gene id | pyya |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 3003608 ~ 3012859 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU242013 | lncRNA | upstream | 100777 | 2902229 ~ 2902895 (+) | False | LOC113528221 |
| TU242059 | lncRNA | upstream | 232362 | 2770686 ~ 2771310 (+) | True | G204362 |
| TU241998 | lncRNA | upstream | 266386 | 2544989 ~ 2737286 (+) | True | G204323 |
| TU241996 | lncRNA | upstream | 266842 | 2544989 ~ 2736830 (+) | False | G204323 |
| TU242026 | lncRNA | upstream | 279863 | 2656576 ~ 2723809 (+) | True | G204333 |
| TU242111 | lncRNA | downstream | 21412 | 3034271 ~ 3036163 (+) | True | G204410 |
| TU242118 | lncRNA | downstream | 52046 | 3064905 ~ 3072726 (+) | True | G204417 |
| XR_003402893.2 | lncRNA | downstream | 179845 | 3192704 ~ 3200055 (+) | True | LOC113527909 |
| TU242361 | lncRNA | downstream | 202928 | 3215787 ~ 3218884 (+) | True | G204633 |
| TU242421 | lncRNA | downstream | 340439 | 3353298 ~ 3356906 (+) | True | G204678 |
| XM_034309769.1 | mRNA | upstream | 20581 | 2914258 ~ 2983091 (+) | True | LOC117598765 |
| XM_034309773.1 | mRNA | upstream | 20581 | 2914258 ~ 2983091 (+) | False | LOC117598765 |
| XM_034309771.1 | mRNA | upstream | 20581 | 2914258 ~ 2983091 (+) | False | LOC117598765 |
| XM_034309770.1 | mRNA | upstream | 20581 | 2914258 ~ 2983091 (+) | False | LOC117598765 |
| XM_034309772.1 | mRNA | upstream | 20581 | 2914258 ~ 2983091 (+) | False | LOC117598765 |
| XM_026916120.2 | mRNA | downstream | 2124 | 3014983 ~ 3031164 (+) | True | mpp2a |
| XM_026916304.2 | mRNA | downstream | 75503 | 3088362 ~ 3146182 (+) | True | LOC113528048 |
| XM_034309925.1 | mRNA | downstream | 147074 | 3159933 ~ 3174285 (+) | True | kat7a |
| XM_034309926.1 | mRNA | downstream | 147074 | 3159933 ~ 3174285 (+) | False | kat7a |
| XM_034310180.1 | mRNA | downstream | 164690 | 3177549 ~ 3182903 (+) | True | zgc:113090 |
| XR_004579364.1 | other | upstream | 847823 | 2155599 ~ 2155849 (+) | True | LOC117598829 |
| TU241504 | other | upstream | 1118194 | 1883075 ~ 1885478 (+) | False | ccndx |
| TU241220 | other | upstream | 1412597 | 1561594 ~ 1591075 (+) | False | syt3 |
| TU241205 | other | upstream | 1647345 | 1353334 ~ 1356327 (+) | False | kmt5c |
| TU240880 | other | upstream | 1767060 | 1220512 ~ 1236612 (+) | False | paqr4a |
| TU242330 | other | downstream | 179853 | 3192712 ~ 3200133 (+) | False | LOC113527909 |
| TU242670 | other | downstream | 953899 | 3966758 ~ 3986284 (+) | True | limd2 |
| TU242671 | other | downstream | 953899 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242672 | other | downstream | 953899 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242673 | other | downstream | 953899 | 3966758 ~ 3986284 (+) | False | limd2 |
