Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU242550 |
| length | 301 |
| lncRNA type | inter_gene |
| GC content | 0.60 |
| exon number | 2 |
| gene id | G204790 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 3645763 ~ 3646675 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU242528 | lncRNA | upstream | 55732 | 3587902 ~ 3590031 (+) | True | G204771 |
| TU242522 | lncRNA | upstream | 58215 | 3534289 ~ 3587548 (+) | False | glyr1 |
| TU242534 | lncRNA | upstream | 72243 | 3570763 ~ 3573520 (+) | False | glyr1 |
| TU242422 | lncRNA | upstream | 242416 | 3399769 ~ 3403347 (+) | True | G204679 |
| TU242421 | lncRNA | upstream | 288857 | 3353298 ~ 3356906 (+) | True | G204678 |
| TU242531 | lncRNA | downstream | 1514 | 3648189 ~ 3649538 (+) | True | G204774 |
| TU242530 | lncRNA | downstream | 26309 | 3672984 ~ 3715580 (+) | True | G204773 |
| TU242579 | lncRNA | downstream | 129929 | 3776604 ~ 3786578 (+) | True | G204815 |
| TU242596 | lncRNA | downstream | 206821 | 3853496 ~ 3882959 (+) | True | G204832 |
| XR_003402906.2 | lncRNA | downstream | 209379 | 3856054 ~ 3868097 (+) | True | LOC113528035 |
| XM_034309671.1 | mRNA | upstream | 5892 | 3630439 ~ 3639871 (+) | True | dus1l |
| XM_026916172.2 | mRNA | upstream | 5892 | 3630440 ~ 3639871 (+) | False | dus1l |
| XM_034309672.1 | mRNA | upstream | 5892 | 3630849 ~ 3639871 (+) | False | dus1l |
| XM_034309979.1 | mRNA | upstream | 58067 | 3563650 ~ 3587696 (+) | True | glyr1 |
| XM_034309980.1 | mRNA | upstream | 58067 | 3563650 ~ 3587696 (+) | False | glyr1 |
| XM_026916239.2 | mRNA | downstream | 38803 | 3685478 ~ 3692367 (+) | True | zgc:86896 |
| XM_026916237.2 | mRNA | downstream | 48054 | 3694729 ~ 3714082 (+) | True | wipi1 |
| XM_034309825.1 | mRNA | downstream | 48054 | 3694729 ~ 3714082 (+) | False | wipi1 |
| XM_026916693.2 | mRNA | downstream | 77088 | 3723763 ~ 3733885 (+) | True | slc16a6b |
| XM_026916694.2 | mRNA | downstream | 77088 | 3723763 ~ 3733885 (+) | False | slc16a6b |
| TU242330 | other | upstream | 445630 | 3192712 ~ 3200133 (+) | False | LOC113527909 |
| TU242114 | other | upstream | 632904 | 3003672 ~ 3012859 (+) | False | pyya |
| XR_004579364.1 | other | upstream | 1489914 | 2155599 ~ 2155849 (+) | True | LOC117598829 |
| TU241504 | other | upstream | 1760285 | 1883075 ~ 1885478 (+) | False | ccndx |
| TU241220 | other | upstream | 2054688 | 1561594 ~ 1591075 (+) | False | syt3 |
| TU242670 | other | downstream | 320083 | 3966758 ~ 3986284 (+) | True | limd2 |
| TU242671 | other | downstream | 320083 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242672 | other | downstream | 320083 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242673 | other | downstream | 320083 | 3966758 ~ 3986284 (+) | False | limd2 |
| trnae-cuc_26 | other | downstream | 324504 | 3971179 ~ 3971250 (+) | True | trnae-cuc_26 |
