Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU242844 |
| length | 346 |
| lncRNA type | inter_gene |
| GC content | 0.58 |
| exon number | 2 |
| gene id | G205040 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 3630694 ~ 3631383 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU242834 | lncRNA | downstream | 10575 | 3617171 ~ 3620119 (-) | True | G205030 |
| TU242842 | lncRNA | downstream | 28455 | 3601002 ~ 3602239 (-) | True | G205038 |
| TU242401 | lncRNA | downstream | 456417 | 3171262 ~ 3174277 (-) | True | G204664 |
| TU242266 | lncRNA | downstream | 555006 | 3073977 ~ 3075688 (-) | False | si:dkey-283b1.7 |
| TU242256 | lncRNA | downstream | 591042 | 3034246 ~ 3039652 (-) | True | si:dkey-283b1.6 |
| TU242874 | lncRNA | upstream | 72900 | 3704283 ~ 3738959 (-) | True | G205063 |
| TU242898 | lncRNA | upstream | 137472 | 3768855 ~ 3776450 (-) | False | kcnc3a |
| TU242900 | lncRNA | upstream | 137472 | 3768855 ~ 3776450 (-) | False | kcnc3a |
| TU242970 | lncRNA | upstream | 317466 | 3948849 ~ 3957710 (-) | False | G205145 |
| TU242972 | lncRNA | upstream | 317466 | 3948849 ~ 3957710 (-) | True | G205145 |
| XM_034309983.1 | mRNA | downstream | 7607 | 3587950 ~ 3623087 (-) | False | csnk1da |
| XM_034309985.1 | mRNA | downstream | 7607 | 3587950 ~ 3623087 (-) | False | csnk1da |
| XM_034309986.1 | mRNA | downstream | 7607 | 3587950 ~ 3623087 (-) | True | csnk1da |
| XM_034309984.1 | mRNA | downstream | 7608 | 3587950 ~ 3623086 (-) | False | csnk1da |
| XM_034310120.1 | mRNA | downstream | 105589 | 3502035 ~ 3525105 (-) | False | si:dkeyp-72e1.9 |
| XM_034310231.1 | mRNA | upstream | 10158 | 3641541 ~ 3653582 (-) | True | gps1 |
| XM_034310234.1 | mRNA | upstream | 10158 | 3641541 ~ 3653580 (-) | False | gps1 |
| XM_034310233.1 | mRNA | upstream | 10570 | 3641953 ~ 3657287 (-) | False | gps1 |
| XM_034310232.1 | mRNA | upstream | 10570 | 3641953 ~ 3657287 (-) | False | gps1 |
| XM_026916575.2 | mRNA | upstream | 27073 | 3658456 ~ 3669302 (-) | True | rac3a |
| XR_004579380.1 | other | downstream | 216927 | 3382831 ~ 3413767 (-) | False | nde1 |
| XR_004579378.1 | other | downstream | 216927 | 3399745 ~ 3413767 (-) | False | nde1 |
| XR_004579379.1 | other | downstream | 216927 | 3399745 ~ 3413767 (-) | False | nde1 |
| XR_003402972.1 | other | downstream | 473985 | 3156617 ~ 3156709 (-) | True | LOC113528657 |
| XR_003402970.1 | other | downstream | 475264 | 3155296 ~ 3155430 (-) | True | LOC113528655 |
| TU243007 | other | upstream | 409098 | 4040481 ~ 4044575 (-) | True | G205173 |
| XR_004579349.1 | other | upstream | 461530 | 4092913 ~ 4117643 (-) | False | dcaf7 |
| XR_004579368.1 | other | upstream | 1091034 | 4722417 ~ 4734886 (-) | False | mlx |
| TU243400 | other | upstream | 1096711 | 4728094 ~ 4734805 (-) | False | mlx |
| TU243535 | other | upstream | 1457953 | 5089336 ~ 5091922 (-) | False | G205633 |
