Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU243105 |
| length | 334 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G205263 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 4393925 ~ 4394258 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU243092 | lncRNA | upstream | 33551 | 4359405 ~ 4360374 (+) | True | G205250 |
| TU243087 | lncRNA | upstream | 37389 | 4356318 ~ 4356536 (+) | True | G205245 |
| TU243084 | lncRNA | upstream | 37739 | 4355539 ~ 4356186 (+) | True | G205242 |
| TU242762 | lncRNA | upstream | 201826 | 4191737 ~ 4192099 (+) | True | G204965 |
| TU242706 | lncRNA | upstream | 286197 | 4105943 ~ 4107728 (+) | True | G204912 |
| TU243147 | lncRNA | downstream | 143240 | 4537498 ~ 4538155 (+) | True | G205303 |
| TU243143 | lncRNA | downstream | 155303 | 4549561 ~ 4551865 (+) | True | G205299 |
| TU243150 | lncRNA | downstream | 169150 | 4563408 ~ 4563654 (+) | True | G205306 |
| TU243167 | lncRNA | downstream | 225960 | 4620218 ~ 4670637 (+) | False | plekhh3 |
| TU243159 | lncRNA | downstream | 277502 | 4671760 ~ 4673029 (+) | True | G205315 |
| XM_026916489.2 | mRNA | upstream | 167880 | 4215915 ~ 4226045 (+) | True | moto |
| XM_026916490.2 | mRNA | upstream | 167880 | 4215915 ~ 4226045 (+) | False | moto |
| XM_026916776.2 | mRNA | upstream | 262450 | 4120854 ~ 4131475 (+) | True | ccdc47 |
| XM_026916773.2 | mRNA | upstream | 289171 | 4057751 ~ 4104754 (+) | True | kcnh6a |
| XM_034310291.1 | mRNA | downstream | 133335 | 4527593 ~ 4549478 (+) | True | ezh1 |
| XM_026916627.2 | mRNA | downstream | 232235 | 4626493 ~ 4670646 (+) | True | plekhh3 |
| XM_026916628.2 | mRNA | downstream | 232235 | 4626493 ~ 4670646 (+) | False | plekhh3 |
| XM_026916630.2 | mRNA | downstream | 261103 | 4655361 ~ 4670646 (+) | False | plekhh3 |
| XM_026916470.2 | mRNA | downstream | 298219 | 4692477 ~ 4711316 (+) | True | retreg3 |
| TU242670 | other | upstream | 407641 | 3966758 ~ 3986284 (+) | True | limd2 |
| TU242671 | other | upstream | 407641 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242672 | other | upstream | 407641 | 3966758 ~ 3986284 (+) | False | limd2 |
| TU242673 | other | upstream | 407641 | 3966758 ~ 3986284 (+) | False | limd2 |
| trnae-cuc_26 | other | upstream | 422675 | 3971179 ~ 3971250 (+) | True | trnae-cuc_26 |
| XR_003402913.2 | other | downstream | 318615 | 4712873 ~ 4721468 (+) | True | psmc3ip |
| XR_003402967.1 | other | downstream | 695940 | 5090198 ~ 5090283 (+) | True | LOC113528651 |
| XR_003402964.1 | other | downstream | 696262 | 5090520 ~ 5090604 (+) | True | LOC113528648 |
| XR_003402966.1 | other | downstream | 696574 | 5090832 ~ 5090916 (+) | True | LOC113528650 |
| XR_003402965.1 | other | downstream | 696990 | 5091248 ~ 5091332 (+) | True | LOC113528649 |
