Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU243455 |
| length | 222 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G205558 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 4828253 ~ 4828546 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU243437 | lncRNA | downstream | 57409 | 4766737 ~ 4770844 (-) | True | G205541 |
| TU243349 | lncRNA | downstream | 127290 | 4699200 ~ 4700963 (-) | True | G205488 |
| TU243345 | lncRNA | downstream | 267831 | 4553297 ~ 4560422 (-) | True | G205484 |
| TU243342 | lncRNA | downstream | 276385 | 4549561 ~ 4551868 (-) | True | G205481 |
| TU243137 | lncRNA | downstream | 313115 | 4514936 ~ 4515138 (-) | True | G205293 |
| TU243527 | lncRNA | upstream | 228364 | 5056910 ~ 5057116 (-) | True | G205628 |
| TU243533 | lncRNA | upstream | 260790 | 5089336 ~ 5091922 (-) | True | G205633 |
| TU243534 | lncRNA | upstream | 260790 | 5089336 ~ 5091922 (-) | False | G205633 |
| TU243538 | lncRNA | upstream | 260790 | 5089336 ~ 5091922 (-) | False | G205633 |
| TU243539 | lncRNA | upstream | 260790 | 5089336 ~ 5091922 (-) | False | G205633 |
| XM_034309940.1 | mRNA | downstream | 93351 | 4722417 ~ 4734902 (-) | True | mlx |
| XM_034309939.1 | mRNA | downstream | 93368 | 4722417 ~ 4734885 (-) | False | mlx |
| XM_026917275.2 | mRNA | downstream | 137756 | 4671755 ~ 4690497 (-) | True | tubg1 |
| XM_026916962.2 | mRNA | downstream | 237588 | 4563378 ~ 4590665 (-) | True | cntnap1 |
| XM_026916535.2 | mRNA | downstream | 313616 | 4498898 ~ 4514637 (-) | True | ramp2 |
| XM_026916469.2 | mRNA | upstream | 123550 | 4952096 ~ 4965626 (-) | True | arf2a |
| XM_026916103.2 | mRNA | upstream | 187021 | 5015567 ~ 5048818 (-) | False | gpatch8 |
| XM_026916108.2 | mRNA | upstream | 187021 | 5015567 ~ 5048740 (-) | False | gpatch8 |
| XM_026916111.2 | mRNA | upstream | 187021 | 5015567 ~ 5048740 (-) | False | gpatch8 |
| XM_026916105.2 | mRNA | upstream | 187021 | 5015567 ~ 5048740 (-) | False | gpatch8 |
| XR_004579368.1 | other | downstream | 93367 | 4722417 ~ 4734886 (-) | False | mlx |
| TU243400 | other | downstream | 93448 | 4728094 ~ 4734805 (-) | False | mlx |
| XR_004579349.1 | other | downstream | 710610 | 4092913 ~ 4117643 (-) | False | dcaf7 |
| TU243007 | other | downstream | 783678 | 4040481 ~ 4044575 (-) | True | G205173 |
| XR_004579378.1 | other | downstream | 1414486 | 3399745 ~ 3413767 (-) | False | nde1 |
| TU243535 | other | upstream | 260790 | 5089336 ~ 5091922 (-) | False | G205633 |
| TU244177 | other | upstream | 926221 | 5754767 ~ 5756733 (-) | True | G206236 |
| TU244224 | other | upstream | 1012591 | 5841137 ~ 5841477 (-) | True | G206282 |
| XR_004579400.1 | other | upstream | 1112316 | 5940862 ~ 5950997 (-) | False | retsat |
| XR_004579347.1 | other | upstream | 1125187 | 5953733 ~ 5961050 (-) | False | LOC113528542 |
