Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU244073 |
| length | 202 |
| lncRNA type | inter_gene |
| GC content | 0.32 |
| exon number | 1 |
| gene id | G206157 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 5629458 ~ 5629659 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0015672 | monovalent inorganic cation transport | biological_process |
| GO:0006813 | potassium ion transport | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU243315 | lncRNA | upstream | 548254 | 5079987 ~ 5081204 (+) | True | G205454 |
| TU243310 | lncRNA | upstream | 614942 | 5003626 ~ 5014516 (+) | True | gosr2 |
| TU243292 | lncRNA | upstream | 631662 | 4936564 ~ 4997796 (+) | True | G205436 |
| TU243290 | lncRNA | upstream | 674100 | 4894540 ~ 4955358 (+) | False | G205436 |
| XR_004579387.1 | lncRNA | upstream | 703776 | 4923914 ~ 4925682 (+) | True | LOC117598842 |
| TU244143 | lncRNA | downstream | 105711 | 5735370 ~ 5735607 (+) | True | G206212 |
| TU244156 | lncRNA | downstream | 125193 | 5754852 ~ 5756939 (+) | True | G206221 |
| XR_004579445.1 | lncRNA | downstream | 239203 | 5868862 ~ 5869806 (+) | True | LOC117599005 |
| TU244231 | lncRNA | downstream | 267726 | 5897385 ~ 5898200 (+) | False | tmem98 |
| TU244235 | lncRNA | downstream | 288786 | 5918445 ~ 5925185 (+) | True | G206289 |
| XM_026916897.2 | mRNA | upstream | 2478 | 5108421 ~ 5626980 (+) | False | asic2 |
| XM_034310193.1 | mRNA | upstream | 2478 | 5115179 ~ 5626980 (+) | False | asic2 |
| XM_026916896.2 | mRNA | upstream | 2478 | 5494957 ~ 5626980 (+) | True | asic2 |
| XM_026916179.2 | mRNA | upstream | 525584 | 5096322 ~ 5103874 (+) | True | hrob |
| XM_026917205.2 | mRNA | upstream | 537641 | 5089263 ~ 5091817 (+) | True | rps11 |
| XM_026917073.2 | mRNA | downstream | 159062 | 5788721 ~ 5824200 (+) | True | kcnj19a |
| XM_026916323.2 | mRNA | downstream | 259893 | 5889552 ~ 5897559 (+) | True | tmem98 |
| XM_026916324.2 | mRNA | downstream | 259924 | 5889583 ~ 5897559 (+) | False | tmem98 |
| XM_026917100.2 | mRNA | downstream | 394637 | 6024296 ~ 6025839 (+) | True | LOC113528511 |
| XM_026916485.2 | mRNA | downstream | 489834 | 6119493 ~ 6128811 (+) | True | zgc:100868 |
| XR_003402965.1 | other | upstream | 538126 | 5091248 ~ 5091332 (+) | True | LOC113528649 |
| XR_003402966.1 | other | upstream | 538542 | 5090832 ~ 5090916 (+) | True | LOC113528650 |
| XR_003402964.1 | other | upstream | 538854 | 5090520 ~ 5090604 (+) | True | LOC113528648 |
| XR_003402967.1 | other | upstream | 539175 | 5090198 ~ 5090283 (+) | True | LOC113528651 |
| XR_003402913.2 | other | upstream | 907990 | 4712873 ~ 4721468 (+) | True | psmc3ip |
| TU244082 | other | downstream | 27953 | 5657612 ~ 5660848 (+) | True | G206166 |
| TU244359 | other | downstream | 501124 | 6130783 ~ 6134571 (+) | True | si:ch211-198p11.6 |
| TU244360 | other | downstream | 501124 | 6130783 ~ 6134571 (+) | False | si:ch211-198p11.6 |
| XR_004579365.1 | other | downstream | 530675 | 6160334 ~ 6175366 (+) | False | mapk3 |
| TU244376 | other | downstream | 560506 | 6190165 ~ 6194964 (+) | True | ypel3 |
