Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU244662 |
| length | 766 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G206628 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 6203312 ~ 6204196 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003402891.2 | lncRNA | downstream | 13386 | 6187474 ~ 6189926 (-) | True | LOC113527891 |
| XR_003402949.2 | lncRNA | downstream | 249808 | 5952798 ~ 5953504 (-) | True | LOC113528476 |
| TU244141 | lncRNA | downstream | 475632 | 5721634 ~ 5727680 (-) | True | G206210 |
| TU244080 | lncRNA | downstream | 571393 | 5631715 ~ 5631919 (-) | True | G206164 |
| XR_003402932.2 | lncRNA | downstream | 918407 | 5280730 ~ 5284905 (-) | True | LOC113528378 |
| TU244696 | lncRNA | upstream | 69620 | 6273816 ~ 6346363 (-) | True | G206649 |
| TU244981 | lncRNA | upstream | 441901 | 6646097 ~ 6647814 (-) | False | stat5a |
| TU245006 | lncRNA | upstream | 620700 | 6824896 ~ 6825760 (-) | True | G206924 |
| TU245005 | lncRNA | upstream | 622172 | 6826368 ~ 6828146 (-) | True | G206923 |
| TU245188 | lncRNA | upstream | 898052 | 7102248 ~ 7102389 (-) | True | G207057 |
| XM_034309895.1 | mRNA | downstream | 43140 | 6149355 ~ 6160172 (-) | True | nudt9 |
| XM_026916165.2 | mRNA | downstream | 46463 | 6149355 ~ 6156849 (-) | False | nudt9 |
| XM_026917011.2 | mRNA | downstream | 134471 | 6026279 ~ 6068841 (-) | True | arhgap23a |
| XM_026916518.2 | mRNA | upstream | 19274 | 6223470 ~ 6238688 (-) | True | atp2a1 |
| XM_026916256.2 | mRNA | upstream | 44586 | 6248782 ~ 6251486 (-) | True | hsp70.3 |
| XM_026916749.2 | mRNA | upstream | 73020 | 6277216 ~ 6303481 (-) | False | aclya |
| XM_026916748.2 | mRNA | upstream | 73020 | 6277216 ~ 6303481 (-) | True | aclya |
| XM_034310084.1 | mRNA | upstream | 103474 | 6307670 ~ 6312808 (-) | False | cnp |
| TU244626 | other | downstream | 8316 | 6126910 ~ 6194996 (-) | True | G206604 |
| XR_004579347.1 | other | downstream | 242262 | 5953733 ~ 5961050 (-) | False | LOC113528542 |
| XR_004579346.1 | other | downstream | 242262 | 5953733 ~ 5961050 (-) | True | LOC113528542 |
| XR_004579400.1 | other | downstream | 252315 | 5940862 ~ 5950997 (-) | False | retsat |
| TU244224 | other | downstream | 361835 | 5841137 ~ 5841477 (-) | True | G206282 |
| trnac-gca_16 | other | upstream | 1066710 | 7270906 ~ 7270977 (-) | True | trnac-gca_16 |
| trnac-gca_17 | other | upstream | 1068059 | 7272255 ~ 7272326 (-) | True | trnac-gca_17 |
| trnac-gca_19 | other | upstream | 1068861 | 7273057 ~ 7273128 (-) | True | trnac-gca_19 |
| trnac-gca_20 | other | upstream | 1070110 | 7274306 ~ 7274377 (-) | True | trnac-gca_20 |
| TU245410 | other | upstream | 1114407 | 7318603 ~ 7321962 (-) | True | G207231 |
