Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU245372 |
| length | 224 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G207198 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 7176532 ~ 7176755 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU245188 | lncRNA | downstream | 74143 | 7102248 ~ 7102389 (-) | True | G207057 |
| TU245005 | lncRNA | downstream | 348386 | 6826368 ~ 6828146 (-) | True | G206923 |
| TU245006 | lncRNA | downstream | 350772 | 6824896 ~ 6825760 (-) | True | G206924 |
| TU244981 | lncRNA | downstream | 528718 | 6646097 ~ 6647814 (-) | False | stat5a |
| TU244696 | lncRNA | downstream | 830169 | 6273816 ~ 6346363 (-) | True | G206649 |
| TU245396 | lncRNA | upstream | 50630 | 7227385 ~ 7227664 (-) | True | G207221 |
| TU245401 | lncRNA | upstream | 60918 | 7237673 ~ 7237881 (-) | True | G207226 |
| TU245403 | lncRNA | upstream | 63486 | 7240241 ~ 7240907 (-) | True | G207227 |
| TU245380 | lncRNA | upstream | 78870 | 7255625 ~ 7262113 (-) | True | G207205 |
| TU245440 | lncRNA | upstream | 135327 | 7312082 ~ 7313655 (-) | True | G207254 |
| XM_034309697.1 | mRNA | downstream | 29620 | 7135337 ~ 7146912 (-) | False | LOC113528017 |
| XM_034309696.1 | mRNA | downstream | 29620 | 7135337 ~ 7146912 (-) | False | LOC113528017 |
| XM_026916245.2 | mRNA | downstream | 29620 | 7135337 ~ 7146912 (-) | False | LOC113528017 |
| XM_026916244.2 | mRNA | downstream | 29620 | 7135337 ~ 7146912 (-) | True | LOC113528017 |
| XM_026917287.2 | mRNA | downstream | 109184 | 7058969 ~ 7067348 (-) | True | kcnj12b |
| XM_026916930.2 | mRNA | upstream | 40827 | 7217582 ~ 7225228 (-) | True | rpl19 |
| XM_034309871.1 | mRNA | upstream | 158158 | 7334913 ~ 7376030 (-) | False | mapk8ip3 |
| XM_026916364.2 | mRNA | upstream | 158158 | 7334913 ~ 7376030 (-) | False | mapk8ip3 |
| XM_026916354.2 | mRNA | upstream | 158158 | 7334913 ~ 7376030 (-) | False | mapk8ip3 |
| XM_026916363.2 | mRNA | upstream | 158158 | 7334913 ~ 7376030 (-) | False | mapk8ip3 |
| TU244626 | other | downstream | 981536 | 6126910 ~ 6194996 (-) | True | G206604 |
| XR_004579347.1 | other | downstream | 1215482 | 5953733 ~ 5961050 (-) | False | LOC113528542 |
| XR_004579346.1 | other | downstream | 1215482 | 5953733 ~ 5961050 (-) | True | LOC113528542 |
| XR_004579400.1 | other | downstream | 1225535 | 5940862 ~ 5950997 (-) | False | retsat |
| TU244224 | other | downstream | 1335055 | 5841137 ~ 5841477 (-) | True | G206282 |
| trnac-gca_16 | other | upstream | 94151 | 7270906 ~ 7270977 (-) | True | trnac-gca_16 |
| trnac-gca_17 | other | upstream | 95500 | 7272255 ~ 7272326 (-) | True | trnac-gca_17 |
| trnac-gca_19 | other | upstream | 96302 | 7273057 ~ 7273128 (-) | True | trnac-gca_19 |
| trnac-gca_20 | other | upstream | 97551 | 7274306 ~ 7274377 (-) | True | trnac-gca_20 |
| TU245410 | other | upstream | 141848 | 7318603 ~ 7321962 (-) | True | G207231 |
