Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246211 |
| length | 890 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G207932 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 8804488 ~ 8805433 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246198 | lncRNA | upstream | 32012 | 8754701 ~ 8772476 (+) | False | LOC113528294 |
| TU246265 | lncRNA | upstream | 36583 | 8764526 ~ 8767905 (+) | True | G207980 |
| TU246197 | lncRNA | upstream | 44695 | 8752715 ~ 8759793 (+) | False | LOC113528294 |
| XR_004579363.1 | lncRNA | upstream | 44696 | 8753247 ~ 8759792 (+) | False | LOC113528294 |
| XR_003402924.2 | lncRNA | upstream | 44696 | 8755317 ~ 8759792 (+) | True | LOC113528294 |
| TU246318 | lncRNA | downstream | 46370 | 8851803 ~ 8874292 (+) | True | G208004 |
| TU246433 | lncRNA | downstream | 151827 | 8957260 ~ 8958068 (+) | False | asphd1 |
| TU246445 | lncRNA | downstream | 176594 | 8982027 ~ 8983311 (+) | True | G208105 |
| TU246490 | lncRNA | downstream | 216742 | 9022175 ~ 9022947 (+) | True | G208120 |
| TU246492 | lncRNA | downstream | 221856 | 9027289 ~ 9027537 (+) | True | G208122 |
| XM_026917121.2 | mRNA | upstream | 319544 | 8454003 ~ 8484944 (+) | True | LOC113528522 |
| XM_026917167.2 | mRNA | upstream | 446337 | 8311016 ~ 8358151 (+) | True | ngfra |
| XM_026916463.2 | mRNA | upstream | 578483 | 8219525 ~ 8226005 (+) | True | tmub2 |
| XM_026916464.2 | mRNA | upstream | 578483 | 8219527 ~ 8226005 (+) | False | tmub2 |
| XM_026916181.2 | mRNA | upstream | 586137 | 8212034 ~ 8218351 (+) | True | asb16 |
| XM_034310186.1 | mRNA | downstream | 37764 | 8843197 ~ 8873465 (+) | True | LOC113528198 |
| XM_034310049.1 | mRNA | downstream | 70799 | 8876232 ~ 8882985 (+) | True | LOC113528197 |
| XM_026916345.2 | mRNA | downstream | 81972 | 8887405 ~ 8893797 (+) | True | LOC113528067 |
| XM_034310187.1 | mRNA | downstream | 97295 | 8902728 ~ 8904664 (+) | True | LOC113528196 |
| XM_034310050.1 | mRNA | downstream | 104237 | 8909670 ~ 8915323 (+) | True | LOC113528195 |
| trnas-cga_1 | other | upstream | 796221 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 950979 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnac-gca_21 | other | upstream | 1504804 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| trnac-gca_18 | other | upstream | 1531957 | 7272460 ~ 7272531 (+) | True | trnac-gca_18 |
| XR_004579327.1 | other | upstream | 1688553 | 7108178 ~ 7115935 (+) | False | LOC113528597 |
| XR_003402909.1 | other | downstream | 91185 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| TU246534 | other | downstream | 256132 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402918.2 | other | downstream | 1138873 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU247340 | other | downstream | 1543969 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 1566982 | 10372415 ~ 10417881 (+) | False | G208781 |
