RNA id: XM_026916037.2


Basic Information

Item Value
RNA id XM_026916037.2
length 410
RNA type mRNA
GC content 0.52
exon number 4
gene id ndufa4l
representative False

Chromosome Information

Item Value
chromosome id NC_047607.1
NCBI id CM018553.1
chromosome length 26458119
location 8707954 ~ 8713318 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome
species striped catfish
(Pangasianodon hypophthalmus)

Sequence

CCTCGTTGCTAGTCGCGCTAGCCTAATCGCTCAGTGTGACTCTCGACAAGGCCGCAGTTAAACGCGTTACCGCTGTGTGAAATTTCCTGGGACAGCTACAATGTTCAGCACAGTTAGCCGTCAGCTGAAAAGCCATCCGGCTCTGATCCCGCTCTTTATCTTCATCGGAGGCGGCTGTACGATGTCTCTGTCTTACTTGGCTAGACTGGCTTTCCGTAACCCGGACGTATGCTGGGACAAAGCGAACAACCCCGAACCCTGGAACAAACTGGGGCCCAATGATCAGTACAAGTTTTTCTCCGTGAACATGGACTACAGCAAACTGAAGAAGGATCGGCCAGACTTCTAAATGCACCGAATCTGGAGAAGCCTCCTGGCCGCACAATGCTGGACCATAGActtgagaaaaa

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU246332 lncRNA downstream 58789 8574635 ~ 8649363 (-) True G208016
TU246164 lncRNA downstream 173440 8534503 ~ 8534712 (-) True G207895
TU246126 lncRNA downstream 215111 8492815 ~ 8493041 (-) True G207860
TU246052 lncRNA downstream 275891 8431998 ~ 8432261 (-) True G207793
TU245988 lncRNA downstream 350078 8353710 ~ 8358074 (-) True G207732
TU246390 lncRNA upstream 147266 8860563 ~ 8873502 (-) True G208062
TU246391 lncRNA upstream 158679 8871976 ~ 8914559 (-) True G208063
TU246437 lncRNA upstream 242145 8955442 ~ 8955655 (-) True G208097
TU246438 lncRNA upstream 242569 8955866 ~ 8956397 (-) True G208098
TU246439 lncRNA upstream 243964 8957261 ~ 8958211 (-) True G208099
XM_026916186.2 mRNA downstream 48031 8566771 ~ 8660121 (-) True spop
XM_034309852.1 mRNA downstream 57401 8566771 ~ 8650751 (-) False spop
XM_026916916.2 mRNA downstream 418344 8279767 ~ 8289808 (-) False selenow2a
XM_026916915.2 mRNA downstream 418344 8285149 ~ 8289808 (-) True selenow2a
XM_026916699.2 mRNA downstream 440514 8249885 ~ 8267638 (-) True slc4a1a
XM_034309971.1 mRNA upstream 3027 8716324 ~ 8728598 (-) False slc35b1
XM_026916460.2 mRNA upstream 3027 8716324 ~ 8728598 (-) True slc35b1
XM_026916458.2 mRNA upstream 16668 8729965 ~ 8745043 (-) True fam117aa
XM_026916770.2 mRNA upstream 34412 8747709 ~ 8762587 (-) False rundc3aa
XM_026916771.2 mRNA upstream 34412 8747709 ~ 8762412 (-) True rundc3aa
XR_003402976.1 other downstream 423560 8284474 ~ 8284592 (-) True LOC113528661
XR_003402917.2 other downstream 440514 8249885 ~ 8267638 (-) False slc4a1a
TU245460 other downstream 1277080 7425730 ~ 7431072 (-) False natd1
trnav-cac_10 other upstream 474223 9187520 ~ 9187592 (-) True trnav-cac_10
TU246677 other upstream 483199 9196496 ~ 9203640 (-) False dnal4a
TU246678 other upstream 483199 9196496 ~ 9203640 (-) True dnal4a
TU246802 other upstream 696507 9409804 ~ 9419584 (-) False prr15la
TU246803 other upstream 696507 9409804 ~ 9419584 (-) False prr15la

Expression Profile