Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246391 |
| length | 848 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G208063 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 8871976 ~ 8914559 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246332 | lncRNA | downstream | 222613 | 8574635 ~ 8649363 (-) | True | G208016 |
| TU246164 | lncRNA | downstream | 337264 | 8534503 ~ 8534712 (-) | True | G207895 |
| TU246126 | lncRNA | downstream | 378935 | 8492815 ~ 8493041 (-) | True | G207860 |
| TU246052 | lncRNA | downstream | 439715 | 8431998 ~ 8432261 (-) | True | G207793 |
| TU245988 | lncRNA | downstream | 513902 | 8353710 ~ 8358074 (-) | True | G207732 |
| TU246437 | lncRNA | upstream | 40883 | 8955442 ~ 8955655 (-) | True | G208097 |
| TU246438 | lncRNA | upstream | 41307 | 8955866 ~ 8956397 (-) | True | G208098 |
| TU246439 | lncRNA | upstream | 42702 | 8957261 ~ 8958211 (-) | True | G208099 |
| TU246517 | lncRNA | upstream | 92441 | 9007000 ~ 9007259 (-) | True | G208145 |
| TU246529 | lncRNA | upstream | 110202 | 9024761 ~ 9024983 (-) | True | G208151 |
| XM_026916561.2 | mRNA | downstream | 37240 | 8811408 ~ 8834736 (-) | False | taok2a |
| XM_026916560.2 | mRNA | downstream | 37240 | 8811408 ~ 8834736 (-) | True | taok2a |
| XM_026917151.2 | mRNA | downstream | 62995 | 8805242 ~ 8808981 (-) | True | cdipt |
| XM_026917145.2 | mRNA | downstream | 69121 | 8795520 ~ 8802855 (-) | False | LOC113528536 |
| XM_026916344.2 | mRNA | upstream | 6950 | 8921509 ~ 8927911 (-) | True | hirip3 |
| XM_026917257.2 | mRNA | upstream | 15052 | 8929611 ~ 8936540 (-) | True | kctd13 |
| XM_026916735.2 | mRNA | upstream | 23004 | 8937563 ~ 8953319 (-) | False | sez6l2 |
| XM_026916736.2 | mRNA | upstream | 23004 | 8937563 ~ 8952757 (-) | False | sez6l2 |
| XM_026916734.2 | mRNA | upstream | 23004 | 8937563 ~ 8952757 (-) | True | sez6l2 |
| TU246334 | other | downstream | 158658 | 8707954 ~ 8713318 (-) | True | ndufa4l |
| XR_003402976.1 | other | downstream | 587384 | 8284474 ~ 8284592 (-) | True | LOC113528661 |
| XR_003402917.2 | other | downstream | 604338 | 8249885 ~ 8267638 (-) | False | slc4a1a |
| TU245462 | other | downstream | 1440904 | 7425730 ~ 7431072 (-) | False | natd1 |
| trnav-cac_10 | other | upstream | 272961 | 9187520 ~ 9187592 (-) | True | trnav-cac_10 |
| TU246677 | other | upstream | 281937 | 9196496 ~ 9203640 (-) | False | dnal4a |
| TU246678 | other | upstream | 281937 | 9196496 ~ 9203640 (-) | True | dnal4a |
| TU246802 | other | upstream | 495245 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246803 | other | upstream | 495245 | 9409804 ~ 9419584 (-) | False | prr15la |
