Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246433 |
| length | 809 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 1 |
| gene id | asphd1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 8950466 ~ 8958100 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246318 | lncRNA | upstream | 82968 | 8851803 ~ 8874292 (+) | True | G208004 |
| TU246211 | lncRNA | upstream | 151827 | 8804488 ~ 8805433 (+) | True | G207932 |
| TU246198 | lncRNA | upstream | 184784 | 8754701 ~ 8772476 (+) | False | LOC113528294 |
| TU246265 | lncRNA | upstream | 189355 | 8764526 ~ 8767905 (+) | True | G207980 |
| XR_004579363.1 | lncRNA | upstream | 197468 | 8753247 ~ 8759792 (+) | False | LOC113528294 |
| TU246445 | lncRNA | downstream | 23959 | 8982027 ~ 8983311 (+) | True | G208105 |
| TU246490 | lncRNA | downstream | 64107 | 9022175 ~ 9022947 (+) | True | G208120 |
| TU246492 | lncRNA | downstream | 69221 | 9027289 ~ 9027537 (+) | True | G208122 |
| TU246494 | lncRNA | downstream | 71603 | 9029671 ~ 9029875 (+) | True | G208124 |
| TU246495 | lncRNA | downstream | 73325 | 9031393 ~ 9031921 (+) | True | G208125 |
| XM_034310051.1 | mRNA | upstream | 35767 | 8916948 ~ 8921493 (+) | True | LOC117598844 |
| XM_034310050.1 | mRNA | upstream | 41937 | 8909670 ~ 8915323 (+) | True | LOC113528195 |
| XM_034310187.1 | mRNA | upstream | 52596 | 8902728 ~ 8904664 (+) | True | LOC113528196 |
| XM_026916345.2 | mRNA | upstream | 63463 | 8887405 ~ 8893797 (+) | True | LOC113528067 |
| XM_034310049.1 | mRNA | upstream | 74275 | 8876232 ~ 8882985 (+) | True | LOC113528197 |
| XM_026916597.1 | mRNA | downstream | 4080 | 8962148 ~ 8966280 (+) | True | cabp5b |
| XM_026916898.2 | mRNA | downstream | 28504 | 8986572 ~ 8990189 (+) | True | LOC113528379 |
| XM_034310042.1 | mRNA | downstream | 35450 | 8993518 ~ 9006845 (+) | False | sh2b1 |
| XM_026916621.2 | mRNA | downstream | 37028 | 8995096 ~ 9006845 (+) | True | sh2b1 |
| XM_034310041.1 | mRNA | downstream | 37028 | 8995096 ~ 9006845 (+) | False | sh2b1 |
| XR_003402909.1 | other | upstream | 54583 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| trnas-cga_1 | other | upstream | 948993 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 1103751 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnac-gca_21 | other | upstream | 1657576 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| trnac-gca_18 | other | upstream | 1684729 | 7272460 ~ 7272531 (+) | True | trnac-gca_18 |
| TU246534 | other | downstream | 103497 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402918.2 | other | downstream | 986238 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU247340 | other | downstream | 1391334 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 1414347 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | downstream | 1454916 | 10412984 ~ 10417881 (+) | True | G208781 |
