Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246517 |
| length | 260 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 1 |
| gene id | G208145 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9007000 ~ 9007259 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246439 | lncRNA | downstream | 48789 | 8957261 ~ 8958211 (-) | True | G208099 |
| TU246438 | lncRNA | downstream | 50603 | 8955866 ~ 8956397 (-) | True | G208098 |
| TU246437 | lncRNA | downstream | 51345 | 8955442 ~ 8955655 (-) | True | G208097 |
| TU246391 | lncRNA | downstream | 92441 | 8871976 ~ 8914559 (-) | True | G208063 |
| TU246390 | lncRNA | downstream | 133498 | 8860563 ~ 8873502 (-) | True | G208062 |
| TU246529 | lncRNA | upstream | 17502 | 9024761 ~ 9024983 (-) | True | G208151 |
| TU246531 | lncRNA | upstream | 23266 | 9030525 ~ 9030978 (-) | True | G208153 |
| TU246536 | lncRNA | upstream | 54321 | 9061580 ~ 9063507 (-) | True | G208158 |
| TU246570 | lncRNA | upstream | 95652 | 9102911 ~ 9103126 (-) | True | G208189 |
| TU246658 | lncRNA | upstream | 114937 | 9122196 ~ 9123881 (-) | False | LOC113527952 |
| XM_026916899.2 | mRNA | downstream | 23623 | 8973287 ~ 8983377 (-) | True | pitpnbl |
| XM_026916735.2 | mRNA | downstream | 53681 | 8937563 ~ 8953319 (-) | False | sez6l2 |
| XM_026916736.2 | mRNA | downstream | 54243 | 8937563 ~ 8952757 (-) | False | sez6l2 |
| XM_026916734.2 | mRNA | downstream | 54243 | 8937563 ~ 8952757 (-) | True | sez6l2 |
| XM_034310141.1 | mRNA | downstream | 55240 | 8937563 ~ 8951760 (-) | False | sez6l2 |
| XM_026916526.2 | mRNA | upstream | 15287 | 9022546 ~ 9032032 (-) | True | lat |
| XM_026916527.2 | mRNA | upstream | 15287 | 9022546 ~ 9032027 (-) | False | lat |
| XM_026916525.2 | mRNA | upstream | 25585 | 9032844 ~ 9044136 (-) | False | spns1 |
| XM_026916523.2 | mRNA | upstream | 25585 | 9032844 ~ 9044136 (-) | True | spns1 |
| XM_026917054.2 | mRNA | upstream | 38386 | 9045645 ~ 9049091 (-) | False | nfatc2ip |
| TU246334 | other | downstream | 293682 | 8707954 ~ 8713318 (-) | True | ndufa4l |
| XR_003402976.1 | other | downstream | 722408 | 8284474 ~ 8284592 (-) | True | LOC113528661 |
| XR_003402917.2 | other | downstream | 739362 | 8249885 ~ 8267638 (-) | False | slc4a1a |
| TU245462 | other | downstream | 1575928 | 7425730 ~ 7431072 (-) | False | natd1 |
| trnav-cac_10 | other | upstream | 180261 | 9187520 ~ 9187592 (-) | True | trnav-cac_10 |
| TU246677 | other | upstream | 189237 | 9196496 ~ 9203640 (-) | False | dnal4a |
| TU246678 | other | upstream | 189237 | 9196496 ~ 9203640 (-) | True | dnal4a |
| TU246802 | other | upstream | 402545 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246803 | other | upstream | 402545 | 9409804 ~ 9419584 (-) | False | prr15la |
