Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246529 |
| length | 223 |
| lncRNA type | intronic |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G208151 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9024761 ~ 9024983 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246517 | lncRNA | downstream | 17502 | 9007000 ~ 9007259 (-) | True | G208145 |
| TU246439 | lncRNA | downstream | 66550 | 8957261 ~ 8958211 (-) | True | G208099 |
| TU246438 | lncRNA | downstream | 68364 | 8955866 ~ 8956397 (-) | True | G208098 |
| TU246437 | lncRNA | downstream | 69106 | 8955442 ~ 8955655 (-) | True | G208097 |
| TU246391 | lncRNA | downstream | 110202 | 8871976 ~ 8914559 (-) | True | G208063 |
| TU246531 | lncRNA | upstream | 5542 | 9030525 ~ 9030978 (-) | True | G208153 |
| TU246536 | lncRNA | upstream | 36597 | 9061580 ~ 9063507 (-) | True | G208158 |
| TU246570 | lncRNA | upstream | 77928 | 9102911 ~ 9103126 (-) | True | G208189 |
| TU246658 | lncRNA | upstream | 97213 | 9122196 ~ 9123881 (-) | False | LOC113527952 |
| XR_004579419.1 | lncRNA | upstream | 417003 | 9441986 ~ 9446104 (-) | False | LOC117598997 |
| XM_026916899.2 | mRNA | downstream | 41384 | 8973287 ~ 8983377 (-) | True | pitpnbl |
| XM_026916735.2 | mRNA | downstream | 71442 | 8937563 ~ 8953319 (-) | False | sez6l2 |
| XM_026916525.2 | mRNA | upstream | 7861 | 9032844 ~ 9044136 (-) | False | spns1 |
| XM_026916523.2 | mRNA | upstream | 7861 | 9032844 ~ 9044136 (-) | True | spns1 |
| XM_026917054.2 | mRNA | upstream | 20662 | 9045645 ~ 9049091 (-) | False | nfatc2ip |
| XM_034309673.1 | mRNA | upstream | 20662 | 9045645 ~ 9048922 (-) | True | nfatc2ip |
| XM_026916173.2 | mRNA | upstream | 24790 | 9049773 ~ 9056443 (-) | True | sgf29 |
| TU246334 | other | downstream | 311443 | 8707954 ~ 8713318 (-) | True | ndufa4l |
| XR_003402976.1 | other | downstream | 740169 | 8284474 ~ 8284592 (-) | True | LOC113528661 |
| XR_003402917.2 | other | downstream | 757123 | 8249885 ~ 8267638 (-) | False | slc4a1a |
| TU245462 | other | downstream | 1593689 | 7425730 ~ 7431072 (-) | False | natd1 |
| trnav-cac_10 | other | upstream | 162537 | 9187520 ~ 9187592 (-) | True | trnav-cac_10 |
| TU246677 | other | upstream | 171513 | 9196496 ~ 9203640 (-) | False | dnal4a |
| TU246678 | other | upstream | 171513 | 9196496 ~ 9203640 (-) | True | dnal4a |
| TU246802 | other | upstream | 384821 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246803 | other | upstream | 384821 | 9409804 ~ 9419584 (-) | False | prr15la |
