Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246536 |
| length | 766 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 3 |
| gene id | G208158 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9061580 ~ 9063507 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246531 | lncRNA | downstream | 30602 | 9030525 ~ 9030978 (-) | True | G208153 |
| TU246529 | lncRNA | downstream | 36597 | 9024761 ~ 9024983 (-) | True | G208151 |
| TU246517 | lncRNA | downstream | 54321 | 9007000 ~ 9007259 (-) | True | G208145 |
| TU246439 | lncRNA | downstream | 103369 | 8957261 ~ 8958211 (-) | True | G208099 |
| TU246438 | lncRNA | downstream | 105183 | 8955866 ~ 8956397 (-) | True | G208098 |
| TU246570 | lncRNA | upstream | 39404 | 9102911 ~ 9103126 (-) | True | G208189 |
| TU246658 | lncRNA | upstream | 58689 | 9122196 ~ 9123881 (-) | False | LOC113527952 |
| XR_004579419.1 | lncRNA | upstream | 378479 | 9441986 ~ 9446104 (-) | False | LOC117598997 |
| XR_004579418.1 | lncRNA | upstream | 378479 | 9441986 ~ 9446050 (-) | True | LOC117598997 |
| TU246838 | lncRNA | upstream | 431116 | 9494623 ~ 9505750 (-) | True | G208391 |
| XM_026916173.2 | mRNA | downstream | 5137 | 9049773 ~ 9056443 (-) | True | sgf29 |
| XM_026917054.2 | mRNA | downstream | 12489 | 9045645 ~ 9049091 (-) | False | nfatc2ip |
| XM_034309673.1 | mRNA | downstream | 12658 | 9045645 ~ 9048922 (-) | True | nfatc2ip |
| XM_026916525.2 | mRNA | downstream | 17444 | 9032844 ~ 9044136 (-) | False | spns1 |
| XM_026916523.2 | mRNA | downstream | 17444 | 9032844 ~ 9044136 (-) | True | spns1 |
| XM_026916158.2 | mRNA | upstream | 40794 | 9104301 ~ 9120154 (-) | True | si:dkey-93n13.2 |
| XM_034309669.1 | mRNA | upstream | 40794 | 9104301 ~ 9109643 (-) | False | si:dkey-93n13.2 |
| XM_034309667.1 | mRNA | upstream | 49459 | 9112966 ~ 9142871 (-) | False | LOC113527952 |
| XM_034309665.1 | mRNA | upstream | 49459 | 9112966 ~ 9142871 (-) | False | LOC113527952 |
| XM_026916153.2 | mRNA | upstream | 58232 | 9121739 ~ 9142871 (-) | True | LOC113527952 |
| TU246334 | other | downstream | 348262 | 8707954 ~ 8713318 (-) | True | ndufa4l |
| XR_003402976.1 | other | downstream | 776988 | 8284474 ~ 8284592 (-) | True | LOC113528661 |
| XR_003402917.2 | other | downstream | 793942 | 8249885 ~ 8267638 (-) | False | slc4a1a |
| TU245462 | other | downstream | 1630508 | 7425730 ~ 7431072 (-) | False | natd1 |
| trnav-cac_10 | other | upstream | 124013 | 9187520 ~ 9187592 (-) | True | trnav-cac_10 |
| TU246677 | other | upstream | 132989 | 9196496 ~ 9203640 (-) | False | dnal4a |
| TU246678 | other | upstream | 132989 | 9196496 ~ 9203640 (-) | True | dnal4a |
| TU246802 | other | upstream | 346297 | 9409804 ~ 9419584 (-) | False | prr15la |
| TU246803 | other | upstream | 346297 | 9409804 ~ 9419584 (-) | False | prr15la |
