Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246749 |
| length | 688 |
| lncRNA type | inter_gene |
| GC content | 0.36 |
| exon number | 1 |
| gene id | G208326 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9374940 ~ 9375627 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246759 | lncRNA | upstream | 487 | 9373250 ~ 9374453 (+) | True | G208336 |
| TU246625 | lncRNA | upstream | 205924 | 9168275 ~ 9169016 (+) | True | G208229 |
| TU246583 | lncRNA | upstream | 249150 | 9115188 ~ 9125790 (+) | True | G208197 |
| TU246505 | lncRNA | upstream | 327524 | 9045645 ~ 9047416 (+) | True | G208133 |
| TU246502 | lncRNA | upstream | 330818 | 9041794 ~ 9044122 (+) | True | G208132 |
| TU246822 | lncRNA | downstream | 110071 | 9485698 ~ 9490734 (+) | True | G208378 |
| TU246828 | lncRNA | downstream | 119388 | 9495015 ~ 9498049 (+) | True | G208382 |
| TU246850 | lncRNA | downstream | 179985 | 9555612 ~ 9555814 (+) | True | G208403 |
| TU246885 | lncRNA | downstream | 356981 | 9732608 ~ 9734047 (+) | True | G208430 |
| TU246862 | lncRNA | downstream | 361382 | 9737009 ~ 9738866 (+) | True | G208415 |
| XM_026917276.2 | mRNA | upstream | 62158 | 9300101 ~ 9312782 (+) | False | csf2rb |
| XM_026917277.2 | mRNA | upstream | 62158 | 9301142 ~ 9312782 (+) | True | csf2rb |
| XM_026916067.2 | mRNA | upstream | 129156 | 9233003 ~ 9245784 (+) | False | baiap2l2a |
| XM_034309941.1 | mRNA | downstream | 14797 | 9390424 ~ 9400838 (+) | False | si:dkey-110g7.8 |
| XM_026916101.2 | mRNA | downstream | 18116 | 9393743 ~ 9400838 (+) | True | si:dkey-110g7.8 |
| XM_026916102.2 | mRNA | downstream | 18116 | 9393743 ~ 9400838 (+) | False | si:dkey-110g7.8 |
| XM_026917137.2 | mRNA | downstream | 102184 | 9477811 ~ 9488541 (+) | True | nfe2l1a |
| XM_026916970.2 | mRNA | downstream | 403896 | 9779523 ~ 9781922 (+) | True | eve1 |
| TU246534 | other | upstream | 311625 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402909.1 | other | upstream | 472263 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| trnas-cga_1 | other | upstream | 1366673 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 1521431 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnac-gca_21 | other | upstream | 2075256 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| XR_003402918.2 | other | downstream | 568679 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU247340 | other | downstream | 973775 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 996788 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | downstream | 1037357 | 10412984 ~ 10417881 (+) | True | G208781 |
| XR_003402977.1 | other | downstream | 2161420 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
