Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246759 |
| length | 833 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G208336 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9373250 ~ 9374453 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246625 | lncRNA | upstream | 204234 | 9168275 ~ 9169016 (+) | True | G208229 |
| TU246583 | lncRNA | upstream | 247460 | 9115188 ~ 9125790 (+) | True | G208197 |
| TU246505 | lncRNA | upstream | 325834 | 9045645 ~ 9047416 (+) | True | G208133 |
| TU246502 | lncRNA | upstream | 329128 | 9041794 ~ 9044122 (+) | True | G208132 |
| TU246495 | lncRNA | upstream | 341329 | 9031393 ~ 9031921 (+) | True | G208125 |
| TU246749 | lncRNA | downstream | 487 | 9374940 ~ 9375627 (+) | True | G208326 |
| TU246822 | lncRNA | downstream | 111245 | 9485698 ~ 9490734 (+) | True | G208378 |
| TU246828 | lncRNA | downstream | 120562 | 9495015 ~ 9498049 (+) | True | G208382 |
| TU246850 | lncRNA | downstream | 181159 | 9555612 ~ 9555814 (+) | True | G208403 |
| TU246885 | lncRNA | downstream | 358155 | 9732608 ~ 9734047 (+) | True | G208430 |
| XM_026917276.2 | mRNA | upstream | 60468 | 9300101 ~ 9312782 (+) | False | csf2rb |
| XM_026917277.2 | mRNA | upstream | 60468 | 9301142 ~ 9312782 (+) | True | csf2rb |
| XM_026916067.2 | mRNA | upstream | 127466 | 9233003 ~ 9245784 (+) | False | baiap2l2a |
| XM_026916069.2 | mRNA | upstream | 127466 | 9235479 ~ 9245784 (+) | False | baiap2l2a |
| XM_026916068.2 | mRNA | upstream | 127466 | 9235480 ~ 9245784 (+) | True | baiap2l2a |
| XM_034309941.1 | mRNA | downstream | 15971 | 9390424 ~ 9400838 (+) | False | si:dkey-110g7.8 |
| XM_026916101.2 | mRNA | downstream | 19290 | 9393743 ~ 9400838 (+) | True | si:dkey-110g7.8 |
| XM_026916102.2 | mRNA | downstream | 19290 | 9393743 ~ 9400838 (+) | False | si:dkey-110g7.8 |
| XM_026917137.2 | mRNA | downstream | 103358 | 9477811 ~ 9488541 (+) | True | nfe2l1a |
| XM_026916970.2 | mRNA | downstream | 405070 | 9779523 ~ 9781922 (+) | True | eve1 |
| TU246534 | other | upstream | 309935 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402909.1 | other | upstream | 470573 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| trnas-cga_1 | other | upstream | 1364983 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 1519741 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnac-gca_21 | other | upstream | 2073566 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| XR_003402918.2 | other | downstream | 569853 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU247340 | other | downstream | 974949 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 997962 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | downstream | 1038531 | 10412984 ~ 10417881 (+) | True | G208781 |
| XR_003402977.1 | other | downstream | 2162594 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
