Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU246951 |
| length | 1161 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G208472 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 9746285 ~ 9748010 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU246862 | lncRNA | upstream | 7984 | 9737009 ~ 9738866 (+) | True | G208415 |
| TU246885 | lncRNA | upstream | 12803 | 9732608 ~ 9734047 (+) | True | G208430 |
| TU246850 | lncRNA | upstream | 191036 | 9555612 ~ 9555814 (+) | True | G208403 |
| TU246828 | lncRNA | upstream | 248801 | 9495015 ~ 9498049 (+) | True | G208382 |
| TU246822 | lncRNA | upstream | 256116 | 9485698 ~ 9490734 (+) | True | G208378 |
| TU247001 | lncRNA | downstream | 98074 | 9846084 ~ 9858882 (+) | True | G208507 |
| TU246996 | lncRNA | downstream | 116967 | 9864977 ~ 9883127 (+) | True | G208504 |
| TU246973 | lncRNA | downstream | 291399 | 10039409 ~ 10061965 (+) | False | G208488 |
| TU246974 | lncRNA | downstream | 291399 | 10039409 ~ 10061965 (+) | True | G208488 |
| TU246978 | lncRNA | downstream | 291399 | 10039409 ~ 10061965 (+) | False | G208488 |
| XM_026917137.2 | mRNA | upstream | 258309 | 9477811 ~ 9488541 (+) | True | nfe2l1a |
| XM_034309941.1 | mRNA | upstream | 346012 | 9390424 ~ 9400838 (+) | False | si:dkey-110g7.8 |
| XM_026916101.2 | mRNA | upstream | 346012 | 9393743 ~ 9400838 (+) | True | si:dkey-110g7.8 |
| XM_026916102.2 | mRNA | upstream | 346012 | 9393743 ~ 9400838 (+) | False | si:dkey-110g7.8 |
| XM_026917277.2 | mRNA | upstream | 434068 | 9301142 ~ 9312782 (+) | True | csf2rb |
| XM_026916970.2 | mRNA | downstream | 31513 | 9779523 ~ 9781922 (+) | True | eve1 |
| XM_026916012.2 | mRNA | downstream | 58788 | 9806798 ~ 9811581 (+) | True | atp5mc1 |
| XM_026916900.2 | mRNA | downstream | 66074 | 9814084 ~ 9827009 (+) | True | ube2z |
| XM_034310315.1 | mRNA | downstream | 92880 | 9840890 ~ 9879885 (+) | True | igf2bp1 |
| XM_026916952.2 | mRNA | downstream | 138774 | 9886784 ~ 9893496 (+) | True | si:dkey-225f5.4 |
| TU246534 | other | upstream | 683535 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402909.1 | other | upstream | 844173 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| trnas-cga_1 | other | upstream | 1738583 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 1893341 | 7853191 ~ 7853509 (+) | True | G207480 |
| trnac-gca_21 | other | upstream | 2447166 | 7299613 ~ 7299684 (+) | True | trnac-gca_21 |
| XR_003402918.2 | other | downstream | 196296 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU247340 | other | downstream | 601392 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 624405 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | downstream | 664974 | 10412984 ~ 10417881 (+) | True | G208781 |
| XR_003402977.1 | other | downstream | 1789037 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
