Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU247238 |
| length | 478 |
| lncRNA type | inter_gene |
| GC content | 0.52 |
| exon number | 2 |
| gene id | G208701 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 10225583 ~ 10226503 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247237 | lncRNA | upstream | 4044 | 10221283 ~ 10221539 (+) | True | G208700 |
| TU246973 | lncRNA | upstream | 163618 | 10039409 ~ 10061965 (+) | False | G208488 |
| TU246974 | lncRNA | upstream | 163618 | 10039409 ~ 10061965 (+) | True | G208488 |
| TU246978 | lncRNA | upstream | 163618 | 10039409 ~ 10061965 (+) | False | G208488 |
| TU246996 | lncRNA | upstream | 342456 | 9864977 ~ 9883127 (+) | True | G208504 |
| TU247342 | lncRNA | downstream | 115405 | 10341908 ~ 10342224 (+) | True | G208783 |
| TU247330 | lncRNA | downstream | 145912 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247335 | lncRNA | downstream | 145912 | 10372415 ~ 10781459 (+) | False | G208781 |
| TU247337 | lncRNA | downstream | 186481 | 10412984 ~ 10417881 (+) | False | G208781 |
| TU247485 | lncRNA | downstream | 600522 | 10827025 ~ 10828913 (+) | True | G208911 |
| XM_026916903.2 | mRNA | upstream | 2709 | 10215045 ~ 10222874 (+) | True | LOC113528384 |
| XM_026916863.2 | mRNA | upstream | 30377 | 10192804 ~ 10195206 (+) | True | LOC113528352 |
| XM_026916700.2 | mRNA | upstream | 237810 | 9944306 ~ 9987773 (+) | True | rapgefl1 |
| XM_026916963.2 | mRNA | upstream | 299380 | 9917962 ~ 9926203 (+) | True | casc3 |
| XM_026917260.2 | mRNA | upstream | 308482 | 9912768 ~ 9917101 (+) | False | msl1a |
| XM_026916301.2 | mRNA | downstream | 72384 | 10298887 ~ 10341715 (+) | True | helz |
| XM_026916197.2 | mRNA | downstream | 199556 | 10426059 ~ 10448685 (+) | True | lmtk2 |
| XM_026916198.2 | mRNA | downstream | 199556 | 10426059 ~ 10448685 (+) | False | lmtk2 |
| XM_026916762.2 | mRNA | downstream | 248851 | 10475354 ~ 10484206 (+) | True | bri3 |
| XM_026917195.2 | mRNA | downstream | 521643 | 10748146 ~ 10798178 (+) | True | fam20ca |
| XR_003402918.2 | other | upstream | 245629 | 9944306 ~ 9979954 (+) | False | rapgefl1 |
| TU246534 | other | upstream | 1162268 | 9061565 ~ 9063315 (+) | False | nupr1b |
| XR_003402909.1 | other | upstream | 1322906 | 8896618 ~ 8902677 (+) | True | LOC113528069 |
| trnas-cga_1 | other | upstream | 2217316 | 8008186 ~ 8008267 (+) | False | trnas-cga_1 |
| TU245701 | other | upstream | 2372074 | 7853191 ~ 7853509 (+) | True | G207480 |
| TU247340 | other | downstream | 122899 | 10349402 ~ 10417881 (+) | False | G208781 |
| TU247338 | other | downstream | 145912 | 10372415 ~ 10417881 (+) | False | G208781 |
| TU247339 | other | downstream | 186481 | 10412984 ~ 10417881 (+) | True | G208781 |
| XR_003402977.1 | other | downstream | 1310544 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| XR_004579334.1 | other | downstream | 1340616 | 11567119 ~ 11577823 (+) | False | luc7l3 |
