Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU247314 |
| length | 1046 |
| lncRNA type | read_through |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G208771 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 10221710 ~ 10290885 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247295 | lncRNA | downstream | 34458 | 10187036 ~ 10187252 (-) | True | G208758 |
| TU247174 | lncRNA | downstream | 155354 | 10063977 ~ 10066356 (-) | True | G208649 |
| TU247080 | lncRNA | downstream | 293802 | 9877627 ~ 9927908 (-) | True | LOC117599011 |
| TU247137 | lncRNA | downstream | 304181 | 9914907 ~ 9917529 (-) | True | G208613 |
| TU247084 | lncRNA | downstream | 338513 | 9858759 ~ 9883197 (-) | False | LOC117599011 |
| TU247529 | lncRNA | upstream | 51026 | 10341911 ~ 10342222 (-) | True | G208951 |
| TU247554 | lncRNA | upstream | 156851 | 10447736 ~ 10450540 (-) | True | G208964 |
| TU247571 | lncRNA | upstream | 227457 | 10518342 ~ 10518947 (-) | True | G208980 |
| TU247589 | lncRNA | upstream | 342650 | 10633535 ~ 10634150 (-) | True | G208998 |
| TU247803 | lncRNA | upstream | 798128 | 11089013 ~ 11144984 (-) | True | G209189 |
| XM_026916019.2 | mRNA | downstream | 8299 | 10209348 ~ 10213411 (-) | True | anks4b |
| XM_026917246.2 | mRNA | downstream | 14496 | 10197508 ~ 10207214 (-) | True | si:ch211-256e16.3 |
| XM_026917296.2 | mRNA | downstream | 36609 | 10146848 ~ 10185101 (-) | True | mosmoa |
| XM_026917099.2 | mRNA | downstream | 87687 | 10122386 ~ 10134023 (-) | True | nags |
| XM_026916760.2 | mRNA | downstream | 159789 | 10042181 ~ 10061921 (-) | False | col1a1a |
| XM_026917043.2 | mRNA | upstream | 54380 | 10345265 ~ 10355473 (-) | True | cacng1b |
| XM_026916162.2 | mRNA | upstream | 69301 | 10360186 ~ 10373055 (-) | True | cacng4b |
| XM_026916003.2 | mRNA | upstream | 90308 | 10381193 ~ 10384307 (-) | False | aimp2 |
| XM_026916002.2 | mRNA | upstream | 90308 | 10381193 ~ 10384306 (-) | True | aimp2 |
| XM_026916204.2 | mRNA | upstream | 112895 | 10403780 ~ 10407080 (-) | True | pvalb8 |
| XR_004579397.1 | other | downstream | 490460 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 747232 | 9466480 ~ 9474478 (-) | False | copz2 |
| TU246803 | other | downstream | 802126 | 9409804 ~ 9419584 (-) | False | prr15la |
| trnac-gca_22 | other | upstream | 94164 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_003402902.2 | other | upstream | 160611 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| XR_003402978.2 | other | upstream | 1141625 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 1245675 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 1275125 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
