Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU247529 |
| length | 312 |
| lncRNA type | inter_gene |
| GC content | 0.30 |
| exon number | 1 |
| gene id | G208951 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 10341911 ~ 10342222 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247314 | lncRNA | downstream | 51026 | 10221710 ~ 10290885 (-) | True | G208771 |
| TU247295 | lncRNA | downstream | 154659 | 10187036 ~ 10187252 (-) | True | G208758 |
| TU247174 | lncRNA | downstream | 275555 | 10063977 ~ 10066356 (-) | True | G208649 |
| TU247080 | lncRNA | downstream | 414003 | 9877627 ~ 9927908 (-) | True | LOC117599011 |
| TU247137 | lncRNA | downstream | 424382 | 9914907 ~ 9917529 (-) | True | G208613 |
| TU247554 | lncRNA | upstream | 105514 | 10447736 ~ 10450540 (-) | True | G208964 |
| TU247571 | lncRNA | upstream | 176120 | 10518342 ~ 10518947 (-) | True | G208980 |
| TU247589 | lncRNA | upstream | 291313 | 10633535 ~ 10634150 (-) | True | G208998 |
| TU247803 | lncRNA | upstream | 746791 | 11089013 ~ 11144984 (-) | True | G209189 |
| XR_003402938.2 | lncRNA | upstream | 876437 | 11218659 ~ 11221378 (-) | True | LOC113528410 |
| XM_026916857.2 | mRNA | downstream | 45788 | 10230636 ~ 10296123 (-) | False | pitpnc1a |
| XM_026916856.2 | mRNA | downstream | 45789 | 10230636 ~ 10296122 (-) | True | pitpnc1a |
| XM_034310094.1 | mRNA | downstream | 112512 | 10223395 ~ 10229399 (-) | False | dxo |
| XM_026916901.2 | mRNA | downstream | 113097 | 10223395 ~ 10228814 (-) | True | dxo |
| XM_026916019.2 | mRNA | downstream | 128500 | 10209348 ~ 10213411 (-) | True | anks4b |
| XM_026917043.2 | mRNA | upstream | 3043 | 10345265 ~ 10355473 (-) | True | cacng1b |
| XM_026916162.2 | mRNA | upstream | 17964 | 10360186 ~ 10373055 (-) | True | cacng4b |
| XM_026916003.2 | mRNA | upstream | 38971 | 10381193 ~ 10384307 (-) | False | aimp2 |
| XM_026916002.2 | mRNA | upstream | 38971 | 10381193 ~ 10384306 (-) | True | aimp2 |
| XM_026916204.2 | mRNA | upstream | 61558 | 10403780 ~ 10407080 (-) | True | pvalb8 |
| XR_004579397.1 | other | downstream | 610661 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 867433 | 9466480 ~ 9474478 (-) | False | copz2 |
| TU246803 | other | downstream | 922327 | 9409804 ~ 9419584 (-) | False | prr15la |
| trnac-gca_22 | other | upstream | 42827 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_003402902.2 | other | upstream | 109274 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| XR_003402978.2 | other | upstream | 1090288 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 1194338 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 1223788 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
