Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU247589 |
| length | 565 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G208998 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 10633535 ~ 10634150 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU247571 | lncRNA | downstream | 114588 | 10518342 ~ 10518947 (-) | True | G208980 |
| TU247554 | lncRNA | downstream | 182995 | 10447736 ~ 10450540 (-) | True | G208964 |
| TU247529 | lncRNA | downstream | 291313 | 10341911 ~ 10342222 (-) | True | G208951 |
| TU247314 | lncRNA | downstream | 342650 | 10221710 ~ 10290885 (-) | True | G208771 |
| TU247295 | lncRNA | downstream | 446283 | 10187036 ~ 10187252 (-) | True | G208758 |
| TU247803 | lncRNA | upstream | 454863 | 11089013 ~ 11144984 (-) | True | G209189 |
| XR_003402938.2 | lncRNA | upstream | 584509 | 11218659 ~ 11221378 (-) | True | LOC113528410 |
| TU248077 | lncRNA | upstream | 584518 | 11218668 ~ 11221366 (-) | False | LOC113528410 |
| TU248181 | lncRNA | upstream | 754810 | 11388960 ~ 11389231 (-) | True | G209529 |
| TU248190 | lncRNA | upstream | 766572 | 11400722 ~ 11401423 (-) | True | G209538 |
| XM_026916885.2 | mRNA | downstream | 75735 | 10546321 ~ 10557800 (-) | False | nptx2a |
| XM_034309701.1 | mRNA | downstream | 75735 | 10546321 ~ 10557800 (-) | True | nptx2a |
| XM_026916269.2 | mRNA | downstream | 106249 | 10485735 ~ 10527286 (-) | True | baiap2l1b |
| XM_034309977.1 | mRNA | downstream | 163019 | 10451272 ~ 10470516 (-) | False | tecpr1b |
| XM_034309976.1 | mRNA | downstream | 163020 | 10451272 ~ 10470515 (-) | False | tecpr1b |
| XM_026916281.2 | mRNA | upstream | 213551 | 10847701 ~ 10869084 (-) | False | srebf1 |
| XM_026916280.2 | mRNA | upstream | 213551 | 10847701 ~ 10869083 (-) | True | srebf1 |
| XM_026916143.2 | mRNA | upstream | 237884 | 10872034 ~ 10898540 (-) | False | LOC113527942 |
| XM_026916142.2 | mRNA | upstream | 237884 | 10872034 ~ 10898540 (-) | False | LOC113527942 |
| XM_026916141.2 | mRNA | upstream | 237884 | 10872034 ~ 10898540 (-) | True | LOC113527942 |
| XR_003402902.2 | other | downstream | 163017 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| trnac-gca_22 | other | downstream | 248415 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_004579397.1 | other | downstream | 902285 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 1159057 | 9466480 ~ 9474478 (-) | False | copz2 |
| TU246804 | other | downstream | 1213951 | 9413601 ~ 9419584 (-) | True | prr15la |
| XR_003402978.2 | other | upstream | 798360 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 902410 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 931860 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| TU248329 | other | upstream | 1065756 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402968.1 | other | upstream | 1121675 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
