Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248181 |
| length | 272 |
| lncRNA type | inter_gene |
| GC content | 0.54 |
| exon number | 1 |
| gene id | G209529 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 11388960 ~ 11389231 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003402938.2 | lncRNA | downstream | 167582 | 11218659 ~ 11221378 (-) | True | LOC113528410 |
| TU248077 | lncRNA | downstream | 167594 | 11218668 ~ 11221366 (-) | False | LOC113528410 |
| TU247803 | lncRNA | downstream | 243976 | 11089013 ~ 11144984 (-) | True | G209189 |
| TU247589 | lncRNA | downstream | 754810 | 10633535 ~ 10634150 (-) | True | G208998 |
| TU247571 | lncRNA | downstream | 870013 | 10518342 ~ 10518947 (-) | True | G208980 |
| TU248190 | lncRNA | upstream | 11491 | 11400722 ~ 11401423 (-) | True | G209538 |
| TU248193 | lncRNA | upstream | 13847 | 11403078 ~ 11405775 (-) | True | G209541 |
| TU248194 | lncRNA | upstream | 13847 | 11403078 ~ 11476796 (-) | False | G209541 |
| TU248206 | lncRNA | upstream | 142345 | 11531576 ~ 11535697 (-) | True | G209553 |
| TU248288 | lncRNA | upstream | 211241 | 11600472 ~ 11601244 (-) | True | G209618 |
| XM_026917208.2 | mRNA | downstream | 197445 | 11154915 ~ 11191515 (-) | True | ttyh2l |
| XM_034310290.1 | mRNA | downstream | 197726 | 11154915 ~ 11191234 (-) | False | ttyh2l |
| XM_026917210.2 | mRNA | downstream | 204210 | 11154915 ~ 11184750 (-) | False | ttyh2l |
| XM_026916804.2 | mRNA | downstream | 236797 | 11147394 ~ 11152163 (-) | True | LOC113528317 |
| XM_034310021.1 | mRNA | downstream | 243128 | 11078461 ~ 11145832 (-) | False | baiap2a |
| XM_026916043.2 | mRNA | upstream | 37054 | 11426285 ~ 11438335 (-) | True | hs3st3b1a |
| XM_026916453.2 | mRNA | upstream | 104044 | 11493275 ~ 11495487 (-) | True | LOC113528102 |
| XM_026916933.2 | mRNA | upstream | 120500 | 11509731 ~ 11518087 (-) | True | LOC113528402 |
| XM_026917058.2 | mRNA | upstream | 131535 | 11520766 ~ 11529442 (-) | True | slc16a5b |
| XM_026916692.2 | mRNA | upstream | 252926 | 11642157 ~ 11645770 (-) | False | hmox1a |
| XR_003402902.2 | other | downstream | 918442 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| trnac-gca_22 | other | downstream | 1003840 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_004579397.1 | other | downstream | 1657710 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 1914482 | 9466480 ~ 9474478 (-) | False | copz2 |
| TU246804 | other | downstream | 1969376 | 9413601 ~ 9419584 (-) | True | prr15la |
| XR_003402978.2 | other | upstream | 43279 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402963.1 | other | upstream | 147329 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 176779 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| TU248329 | other | upstream | 310675 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402968.1 | other | upstream | 366594 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
