Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248206 |
| length | 712 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 6 |
| gene id | G209553 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 11531576 ~ 11535697 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248194 | lncRNA | downstream | 54780 | 11403078 ~ 11476796 (-) | False | G209541 |
| TU248193 | lncRNA | downstream | 125801 | 11403078 ~ 11405775 (-) | True | G209541 |
| TU248190 | lncRNA | downstream | 130153 | 11400722 ~ 11401423 (-) | True | G209538 |
| TU248181 | lncRNA | downstream | 142345 | 11388960 ~ 11389231 (-) | True | G209529 |
| XR_003402938.2 | lncRNA | downstream | 310198 | 11218659 ~ 11221378 (-) | True | LOC113528410 |
| TU248288 | lncRNA | upstream | 64775 | 11600472 ~ 11601244 (-) | True | G209618 |
| TU248294 | lncRNA | upstream | 74937 | 11610634 ~ 11617188 (-) | True | G209624 |
| XR_003402897.2 | lncRNA | upstream | 83843 | 11619540 ~ 11626068 (-) | True | LOC113527962 |
| TU248298 | lncRNA | upstream | 83949 | 11619646 ~ 11625813 (-) | False | LOC113527962 |
| TU248307 | lncRNA | upstream | 106471 | 11642168 ~ 11647997 (-) | True | hmox1a |
| XM_026917058.2 | mRNA | downstream | 2134 | 11520766 ~ 11529442 (-) | True | slc16a5b |
| XM_026916933.2 | mRNA | downstream | 13489 | 11509731 ~ 11518087 (-) | True | LOC113528402 |
| XM_026916453.2 | mRNA | downstream | 36089 | 11493275 ~ 11495487 (-) | True | LOC113528102 |
| XM_026916043.2 | mRNA | downstream | 93241 | 11426285 ~ 11438335 (-) | True | hs3st3b1a |
| XM_026917208.2 | mRNA | downstream | 340061 | 11154915 ~ 11191515 (-) | True | ttyh2l |
| XM_026916692.2 | mRNA | upstream | 106460 | 11642157 ~ 11645770 (-) | False | hmox1a |
| XM_026916973.2 | mRNA | upstream | 164152 | 11699849 ~ 11701172 (-) | True | zgc:162612 |
| XM_026916218.2 | mRNA | upstream | 209794 | 11745491 ~ 11751424 (-) | False | spc24 |
| XM_026916219.2 | mRNA | upstream | 209794 | 11745491 ~ 11751402 (-) | False | spc24 |
| XM_034309686.1 | mRNA | upstream | 209794 | 11745491 ~ 11751375 (-) | True | spc24 |
| XR_003402978.2 | other | downstream | 98948 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402902.2 | other | downstream | 1061058 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| trnac-gca_22 | other | downstream | 1146456 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| XR_004579397.1 | other | downstream | 1800326 | 9730842 ~ 9731250 (-) | False | hoxb8a |
| XR_004579423.1 | other | downstream | 2057098 | 9466480 ~ 9474478 (-) | False | copz2 |
| XR_003402963.1 | other | upstream | 863 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402973.1 | other | upstream | 30313 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| TU248329 | other | upstream | 164209 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402968.1 | other | upstream | 220128 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
| XR_003402971.1 | other | upstream | 489805 | 12025502 ~ 12025572 (-) | True | LOC113528656 |
