Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248307 |
| length | 1209 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 7 |
| gene id | hmox1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 11642157 ~ 11647997 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003402897.2 | lncRNA | downstream | 16100 | 11619540 ~ 11626068 (-) | True | LOC113527962 |
| TU248298 | lncRNA | downstream | 16355 | 11619646 ~ 11625813 (-) | False | LOC113527962 |
| TU248294 | lncRNA | downstream | 24980 | 11610634 ~ 11617188 (-) | True | G209624 |
| TU248288 | lncRNA | downstream | 40924 | 11600472 ~ 11601244 (-) | True | G209618 |
| TU248206 | lncRNA | downstream | 106471 | 11531576 ~ 11535697 (-) | True | G209553 |
| TU248316 | lncRNA | upstream | 16488 | 11664485 ~ 11665129 (-) | True | G209646 |
| XR_004579362.1 | lncRNA | upstream | 197576 | 11845573 ~ 11879417 (-) | True | LOC117598828 |
| TU248548 | lncRNA | upstream | 420257 | 12068254 ~ 12068622 (-) | True | G209829 |
| TU248549 | lncRNA | upstream | 420816 | 12068813 ~ 12069180 (-) | True | G209830 |
| TU248551 | lncRNA | upstream | 422299 | 12070296 ~ 12070602 (-) | True | G209832 |
| XM_026917058.2 | mRNA | downstream | 112726 | 11520766 ~ 11529442 (-) | True | slc16a5b |
| XM_026916933.2 | mRNA | downstream | 124081 | 11509731 ~ 11518087 (-) | True | LOC113528402 |
| XM_026916453.2 | mRNA | downstream | 146681 | 11493275 ~ 11495487 (-) | True | LOC113528102 |
| XM_026916043.2 | mRNA | downstream | 203833 | 11426285 ~ 11438335 (-) | True | hs3st3b1a |
| XM_026917210.2 | mRNA | downstream | 457418 | 11154915 ~ 11184750 (-) | False | ttyh2l |
| XM_026916973.2 | mRNA | upstream | 51852 | 11699849 ~ 11701172 (-) | True | zgc:162612 |
| XM_026916218.2 | mRNA | upstream | 97494 | 11745491 ~ 11751424 (-) | False | spc24 |
| XM_026916219.2 | mRNA | upstream | 97494 | 11745491 ~ 11751402 (-) | False | spc24 |
| XM_034309686.1 | mRNA | upstream | 97494 | 11745491 ~ 11751375 (-) | True | spc24 |
| XM_026917283.2 | mRNA | upstream | 105046 | 11753043 ~ 11763823 (-) | True | kri1 |
| XR_003402973.1 | other | downstream | 76040 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| XR_003402963.1 | other | downstream | 105490 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| XR_003402978.2 | other | downstream | 209540 | 11432510 ~ 11432628 (-) | True | LOC113528663 |
| XR_003402902.2 | other | downstream | 1171650 | 10451496 ~ 10470518 (-) | False | tecpr1b |
| trnac-gca_22 | other | downstream | 1257048 | 10385049 ~ 10385120 (-) | True | trnac-gca_22 |
| TU248329 | other | upstream | 51909 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402968.1 | other | upstream | 107828 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
| XR_003402971.1 | other | upstream | 377505 | 12025502 ~ 12025572 (-) | True | LOC113528656 |
| TU248755 | other | upstream | 652008 | 12300005 ~ 12315469 (-) | False | LOC113528332 |
| TU248759 | other | upstream | 685861 | 12333858 ~ 12339269 (-) | True | msrb1a |
