Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248505 |
| length | 882 |
| lncRNA type | sense_over |
| GC content | 0.37 |
| exon number | 1 |
| gene id | tbc1d16 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 12049407 ~ 12086058 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248507 | lncRNA | upstream | 23346 | 12061569 ~ 12061782 (+) | True | G209798 |
| TU248481 | lncRNA | upstream | 63996 | 12019863 ~ 12021132 (+) | True | G209775 |
| XR_003402931.2 | lncRNA | upstream | 262218 | 11808261 ~ 11822910 (+) | True | LOC113528367 |
| TU248059 | lncRNA | upstream | 376192 | 11708728 ~ 11708936 (+) | True | G209410 |
| TU248037 | lncRNA | upstream | 450647 | 11633912 ~ 11634481 (+) | True | G209392 |
| TU248585 | lncRNA | downstream | 47251 | 12133260 ~ 12133471 (+) | True | G209863 |
| TU248587 | lncRNA | downstream | 50764 | 12136773 ~ 12139867 (+) | False | LOC113528416 |
| TU248618 | lncRNA | downstream | 115229 | 12201238 ~ 12202277 (+) | True | G209884 |
| TU248620 | lncRNA | downstream | 122227 | 12208236 ~ 12208486 (+) | True | G209886 |
| TU248621 | lncRNA | downstream | 122877 | 12208886 ~ 12209124 (+) | True | G209887 |
| XM_026917101.2 | mRNA | upstream | 39624 | 12033886 ~ 12045504 (+) | True | gaa |
| XM_026917084.2 | mRNA | upstream | 165465 | 11861586 ~ 11919663 (+) | True | grin2ca |
| XM_034309874.1 | mRNA | upstream | 234792 | 11830046 ~ 11850336 (+) | True | rfx1a |
| XM_026916598.2 | mRNA | downstream | 30430 | 12116439 ~ 12122136 (+) | True | cbx4 |
| XM_026916600.2 | mRNA | downstream | 43582 | 12129591 ~ 12132297 (+) | True | cbx8a |
| XM_026916951.2 | mRNA | downstream | 49260 | 12135269 ~ 12140371 (+) | True | LOC113528416 |
| XM_026916816.2 | mRNA | downstream | 72694 | 12158703 ~ 12190070 (+) | False | arhgap17b |
| XM_026916815.2 | mRNA | downstream | 72696 | 12158705 ~ 12190070 (+) | True | arhgap17b |
| XR_004579334.1 | other | upstream | 507305 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402977.1 | other | upstream | 547963 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| TU247340 | other | upstream | 1667247 | 10349402 ~ 10417881 (+) | False | G208781 |
| XR_003402925.2 | other | downstream | 72697 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579399.1 | other | downstream | 1389819 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| trnar-ucu_8 | other | downstream | 3727233 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 3832208 | 15918217 ~ 15968759 (+) | True | G211913 |
| TU251142 | other | downstream | 4054321 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
