Item | Value |
---|---|
RNA id | TU248548 |
length | 369 |
lncRNA type | inter_gene |
GC content | 0.50 |
exon number | 1 |
gene id | G209829 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047607.1 |
NCBI id | CM018553.1 |
chromosome length | 26458119 |
location | 12068254 ~ 12068622 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
XR_004579362.1 | lncRNA | downstream | 188837 | 11845573 ~ 11879417 (-) | True | LOC117598828 |
TU248316 | lncRNA | downstream | 403125 | 11664485 ~ 11665129 (-) | True | G209646 |
TU248307 | lncRNA | downstream | 420257 | 11642168 ~ 11647997 (-) | True | hmox1a |
XR_003402897.2 | lncRNA | downstream | 442186 | 11619540 ~ 11626068 (-) | True | LOC113527962 |
TU248298 | lncRNA | downstream | 442441 | 11619646 ~ 11625813 (-) | False | LOC113527962 |
TU248549 | lncRNA | upstream | 191 | 12068813 ~ 12069180 (-) | True | G209830 |
TU248551 | lncRNA | upstream | 1674 | 12070296 ~ 12070602 (-) | True | G209832 |
TU248558 | lncRNA | upstream | 8050 | 12076672 ~ 12077073 (-) | True | G209839 |
TU248554 | lncRNA | upstream | 15114 | 12083736 ~ 12084702 (-) | True | G209835 |
TU248590 | lncRNA | upstream | 66886 | 12135508 ~ 12135919 (-) | True | G209868 |
XM_026916695.2 | mRNA | downstream | 35496 | 12015201 ~ 12032758 (-) | False | tnpo2 |
XM_026916696.2 | mRNA | downstream | 35496 | 12015201 ~ 12032758 (-) | True | tnpo2 |
XM_026916022.2 | mRNA | downstream | 55278 | 11964121 ~ 12012976 (-) | False | tmem104 |
XM_026916024.2 | mRNA | downstream | 55462 | 11963695 ~ 12012792 (-) | False | tmem104 |
XM_026916021.2 | mRNA | downstream | 55463 | 11964121 ~ 12012791 (-) | False | tmem104 |
XM_026916587.2 | mRNA | upstream | 78874 | 12147496 ~ 12153883 (-) | True | LOC113528185 |
XM_026916823.2 | mRNA | upstream | 121450 | 12190072 ~ 12200474 (-) | True | slc5a11 |
XM_034310196.1 | mRNA | upstream | 121450 | 12190072 ~ 12197857 (-) | False | slc5a11 |
XM_026916812.2 | mRNA | upstream | 133346 | 12201968 ~ 12236027 (-) | True | grid2ipa |
XM_026916822.2 | mRNA | upstream | 170514 | 12239136 ~ 12248090 (-) | True | e4f1 |
XR_003402971.1 | other | downstream | 42682 | 12025502 ~ 12025572 (-) | True | LOC113528656 |
XR_003402968.1 | other | downstream | 312331 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
TU248329 | other | downstream | 367153 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
XR_003402973.1 | other | downstream | 502126 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
XR_003402963.1 | other | downstream | 531576 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
TU248755 | other | upstream | 231383 | 12300005 ~ 12315469 (-) | False | LOC113528332 |
TU248759 | other | upstream | 265236 | 12333858 ~ 12339269 (-) | True | msrb1a |
XR_004579428.1 | other | upstream | 480207 | 12548829 ~ 12559213 (-) | False | tom1 |
XR_004579425.1 | other | upstream | 480207 | 12548829 ~ 12559213 (-) | False | tom1 |
XR_004579426.1 | other | upstream | 480208 | 12548830 ~ 12559213 (-) | False | tom1 |