Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248698 |
| length | 785 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G209945 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 12378946 ~ 12380986 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248695 | lncRNA | upstream | 533 | 12378159 ~ 12378413 (+) | True | G209944 |
| TU248694 | lncRNA | upstream | 862 | 12375907 ~ 12378084 (+) | True | G209943 |
| TU248692 | lncRNA | upstream | 1439 | 12375907 ~ 12377507 (+) | False | G209943 |
| TU248637 | lncRNA | upstream | 4574 | 12367578 ~ 12374372 (+) | True | ndufb10 |
| TU248631 | lncRNA | upstream | 146295 | 12232321 ~ 12232651 (+) | True | G209897 |
| TU248885 | lncRNA | downstream | 165447 | 12546433 ~ 12548503 (+) | True | G210086 |
| TU248969 | lncRNA | downstream | 398263 | 12779249 ~ 12780136 (+) | True | G210160 |
| TU249018 | lncRNA | downstream | 440090 | 12821076 ~ 12821284 (+) | True | G210209 |
| TU249234 | lncRNA | downstream | 664004 | 13044990 ~ 13045833 (+) | True | G210384 |
| TU249423 | lncRNA | downstream | 984698 | 13365684 ~ 13365893 (+) | True | G210532 |
| XM_026916838.2 | mRNA | upstream | 8684 | 12367566 ~ 12370262 (+) | False | ndufb10 |
| XM_026916814.2 | mRNA | upstream | 22419 | 12340950 ~ 12356527 (+) | True | LOC113528323 |
| XM_026916836.2 | mRNA | upstream | 90494 | 12287220 ~ 12288452 (+) | True | fahd1 |
| XM_026916826.2 | mRNA | upstream | 106855 | 12264705 ~ 12272091 (+) | True | narfl |
| XM_026916987.2 | mRNA | downstream | 4989 | 12385975 ~ 12389435 (+) | True | kdelr2a |
| XM_026916328.2 | mRNA | downstream | 15518 | 12396504 ~ 12435649 (+) | True | spag9a |
| XM_026916333.2 | mRNA | downstream | 15518 | 12396504 ~ 12435649 (+) | False | spag9a |
| XM_026916330.2 | mRNA | downstream | 15518 | 12396504 ~ 12435649 (+) | False | spag9a |
| XM_026916335.2 | mRNA | downstream | 15518 | 12396504 ~ 12435649 (+) | False | spag9a |
| XR_003402925.2 | other | upstream | 190357 | 12158706 ~ 12188589 (+) | False | arhgap17b |
| XR_004579334.1 | other | upstream | 801123 | 11567119 ~ 11577823 (+) | False | luc7l3 |
| XR_003402977.1 | other | upstream | 841781 | 11537047 ~ 11537165 (+) | True | LOC113528662 |
| TU247338 | other | upstream | 1961065 | 10372415 ~ 10417881 (+) | False | G208781 |
| XR_004579399.1 | other | downstream | 1094842 | 13475828 ~ 13492850 (+) | False | zgc:158403 |
| trnar-ucu_8 | other | downstream | 3432256 | 15813242 ~ 15813331 (+) | True | trnar-ucu_8 |
| TU251011 | other | downstream | 3537231 | 15918217 ~ 15968759 (+) | True | G211913 |
| TU251142 | other | downstream | 3759344 | 16140330 ~ 16145384 (+) | False | LOC113527983 |
| TU251743 | other | downstream | 4706305 | 17087291 ~ 17109275 (+) | False | srl |
