Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU248700 |
| length | 572 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 2 |
| gene id | G209946 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047607.1 |
| NCBI id | CM018553.1 |
| chromosome length | 26458119 |
| location | 12158070 ~ 12159112 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU248590 | lncRNA | downstream | 22151 | 12135508 ~ 12135919 (-) | True | G209868 |
| TU248554 | lncRNA | downstream | 73368 | 12083736 ~ 12084702 (-) | True | G209835 |
| TU248558 | lncRNA | downstream | 80997 | 12076672 ~ 12077073 (-) | True | G209839 |
| TU248551 | lncRNA | downstream | 87468 | 12070296 ~ 12070602 (-) | True | G209832 |
| TU248549 | lncRNA | downstream | 88890 | 12068813 ~ 12069180 (-) | True | G209830 |
| TU248715 | lncRNA | upstream | 14342 | 12173454 ~ 12174407 (-) | True | G209951 |
| TU248726 | lncRNA | upstream | 77862 | 12236974 ~ 12237192 (-) | True | G209961 |
| TU248756 | lncRNA | upstream | 139012 | 12298124 ~ 12298977 (-) | False | LOC113528332 |
| TU248758 | lncRNA | upstream | 174342 | 12333454 ~ 12333662 (-) | True | G209984 |
| XR_004579344.1 | lncRNA | upstream | 287349 | 12446461 ~ 12463878 (-) | True | LOC117598772 |
| XM_026916587.2 | mRNA | downstream | 4187 | 12147496 ~ 12153883 (-) | True | LOC113528185 |
| XM_026916695.2 | mRNA | downstream | 125312 | 12015201 ~ 12032758 (-) | False | tnpo2 |
| XM_026916696.2 | mRNA | downstream | 125312 | 12015201 ~ 12032758 (-) | True | tnpo2 |
| XM_026916022.2 | mRNA | downstream | 145094 | 11964121 ~ 12012976 (-) | False | tmem104 |
| XM_026916021.2 | mRNA | downstream | 145279 | 11964121 ~ 12012791 (-) | False | tmem104 |
| XM_026916823.2 | mRNA | upstream | 30960 | 12190072 ~ 12200474 (-) | True | slc5a11 |
| XM_034310196.1 | mRNA | upstream | 30960 | 12190072 ~ 12197857 (-) | False | slc5a11 |
| XM_026916812.2 | mRNA | upstream | 42856 | 12201968 ~ 12236027 (-) | True | grid2ipa |
| XM_026916822.2 | mRNA | upstream | 80024 | 12239136 ~ 12248090 (-) | True | e4f1 |
| XM_026916825.2 | mRNA | upstream | 91572 | 12250684 ~ 12261251 (-) | False | zgc:113333 |
| XR_003402971.1 | other | downstream | 132498 | 12025502 ~ 12025572 (-) | True | LOC113528656 |
| XR_003402968.1 | other | downstream | 402147 | 11755825 ~ 11755923 (-) | True | LOC113528652 |
| TU248329 | other | downstream | 456969 | 11699906 ~ 11701101 (-) | False | zgc:162612 |
| XR_003402973.1 | other | downstream | 591942 | 11566010 ~ 11566128 (-) | True | LOC113528658 |
| XR_003402963.1 | other | downstream | 621392 | 11536560 ~ 11536678 (-) | True | LOC113528647 |
| TU248755 | other | upstream | 140893 | 12300005 ~ 12315469 (-) | False | LOC113528332 |
| TU248759 | other | upstream | 174746 | 12333858 ~ 12339269 (-) | True | msrb1a |
| XR_004579428.1 | other | upstream | 389717 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579425.1 | other | upstream | 389717 | 12548829 ~ 12559213 (-) | False | tom1 |
| XR_004579426.1 | other | upstream | 389718 | 12548830 ~ 12559213 (-) | False | tom1 |
